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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: d1c3pa_

Fold library idFoldSuperfamilyFamily
d1c3pa_Arginase/deacetylaseArginase/deacetylaseHistone deacetylase, HDAC


Added to library: Tue Mar 16 12:28:53 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKVKLIGTLDYGKYRYPKNHPLKIPRVSLLLRFKDAMNLIDEKELIKSRPATKEELLLFHTEDYINTLME
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Known secondary structure (DSSP)


GGGGGS


TT
GGGS

TT


GGG




TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AERCQCVPKGAREKYNIGGYENPVSYAMFTGSSLATGSTVQAIEEFLKGNVAFNPAGGMHHAFKSRANGF
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Known secondary structure (DSSP) TS

TT

SSSSS
SSTTTTTT
TT


TT
BTTB
BTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence CYINNPAVGIEYLRKKGFKRILYIDLDAHHCDGVQEAFYDTDQVFVLSLHQSPEYAFPFEKGFLEEIGEG
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Known secondary structure (DSSP) BSS
TT



SSS

TT
SS
TTTSTTSSS

TT



G
 .........220.........230.........240.........250.........260.........270.........280
Sequence KGKGYNLNIPLPKGLNDNEFLFALEKSLEIVKEVFEPEVYLLQLGTDPLLEDYLSKFNLSNVAFLKAFNI
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Known secondary structure (DSSP) GGTTS
TT




S

STTBTT
TT
S

B
 .........290.........300.........310.........320.........330.........340.........350
Sequence VREVFGEGVYLGGGGYHPYALARAWTLIWCELSGREVPEKLNNKAKELLKSIDFEEFDDEVDRSYMLETL
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Known secondary structure (DSSP)
S






T



SS

S



SSTT


GGGGG
S
 .........360.........370..
Sequence KDPWRGGEVRKEVKDTLEKAKA
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Known secondary structure (DSSP) S










Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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