PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: d1bd3a_

Fold library id	Fold	Superfamily	Family
d1bd3a_	PRTase-like	PRTase-like	Phosphoribosyltransferases (PRTases)

Links to external resources
Added to library: Tue Mar 16 12:20:23 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q E E S I L Q D I I T R F P N V V L M K Q T A Q L R A M M T I I R D K E T P K E E F V F Y A D R L I R L L I E E A L N E L P F Q K K E V T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T S
B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P L D V S Y H G V S F Y S K I C G V S I V R A G E S M E S G L R A V C R G V R I G K I L I Q R D E T T A E P K L I Y E K L P A D I R E R W V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
B
T G G G G G S T T
T T T
T T G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence M L L D P M C A T A G S V C K A I E V L L R L G V K E E R I I F V N I L A A P Q G I E R V F K E Y P K V R M V T A A V D I C L N S R Y Y I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
G G G
T T
S
T T S

. . . . . . . . . 220 . . . .

Sequence P G I G D F G D R Y F G T M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	E	E	S	I	L	Q	D	I	I	T	R	F	P	N	V	V	L	M	K	Q	T	A	Q	L	R	A	M	M	T	I	I	R	D	K	E	T	P	K	E	E	F	V	F	Y	A	D	R	L	I	R	L	L	I	E	E	A	L	N	E	L	P	F	Q	K	K	E	V	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T																				T	T																							T	T	S		B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	L	D	V	S	Y	H	G	V	S	F	Y	S	K	I	C	G	V	S	I	V	R	A	G	E	S	M	E	S	G	L	R	A	V	C	R	G	V	R	I	G	K	I	L	I	Q	R	D	E	T	T	A	E	P	K	L	I	Y	E	K	L	P	A	D	I	R	E	R	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S								B											T	G	G	G	G	G								S	T	T												T	T	T												T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	L	L	D	P	M	C	A	T	A	G	S	V	C	K	A	I	E	V	L	L	R	L	G	V	K	E	E	R	I	I	F	V	N	I	L	A	A	P	Q	G	I	E	R	V	F	K	E	Y	P	K	V	R	M	V	T	A	A	V	D	I	C	L	N	S	R	Y	Y	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S			S	S														T	T			G	G	G																					T	T										S				T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Sequence	P	G	I	G	D	F	G	D	R	Y	F	G	T	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			S								T