Fold library entry viewer: d1b1ya_

Added to library: Tue Mar 16 12:03:45 2010
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	G	N	Y	V	Q	V	Y	V	M	L	P	L	D	A	V	S	V	N	N	R	F	E	K	G	D	E	L	R	A	Q	L	R	K	L	V	E	A	G	V	D	G	V	M	V	D	V	W	W	G	L	V	E	G	K	G	P	K	A	Y	D	W	S	A	Y	K	Q	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G										T	T	S	S		T	T	S				T														T	T										T	T	T	G	G	G	G	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	L	V	Q	K	A	G	L	K	L	Q	A	I	M	S	F	H	Q	C	G	G	N	V	G	D	A	V	N	I	P	I	P	Q	W	V	R	D	V	G	T	R	D	P	D	I	F	Y	T	D	G	H	G	T	R	N	I	E	Y	L	T	L	G	V	D	N	Q	P	L	F	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T										S		B	S	S	S	T	T			S		B		S												G	G	G					T	T										G	G	G	T	T			T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	R	S	A	V	Q	M	Y	A	D	Y	M	T	S	F	R	E	N	M	K	D	F	L	D	A	G	V	I	V	D	I	E	V	G	L	G	P	A	G	E	L	R	Y	P	S	Y	P	Q	S	H	G	W	S	F	P	G	I	G	E	F	I	C	Y	D	K	Y	L	Q	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																									T										S	G	G	G	B	S	S				S		G	G	G	T			T	T									S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	K	A	A	A	A	A	V	G	H	P	E	W	E	F	P	N	D	A	G	Q	Y	N	D	T	P	E	R	T	Q	F	F	R	D	N	G	T	Y	L	S	E	K	G	R	F	F	L	A	W	Y	S	N	N	L	I	K	H	G	D	R	I	L	D	E	A	N	K	V	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		T	T			S		T	T				T	T			G	G	G	S	T	T	T	S	T	T		G	G	G	S																														T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	Y	K	V	Q	L	A	I	K	I	A	G	V	H	W	W	Y	K	V	P	S	H	A	A	E	L	T	A	G	Y	Y	N	L	H	D	R	D	G	Y	R	T	I	A	R	M	L	K	R	H	R	A	S	I	N	F	T	C	A	E	M	R	D	S	E	Q	P	P	D	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S												T	T		S	S	S	S								T					S	S	S		T	T								T	T	T	T								T	T			G	G	G	S		T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	A	P	E	E	L	V	Q	Q	V	L	S	A	G	W	R	E	G	L	N	V	S	C	E	N	A	L	P	R	Y	D	P	T	A	Y	N	T	I	L	R	N	A	R	P	H	G	I	N	Q	S	G	P	P	E	H	K	L	F	G	F	T	Y	L	R	L	S	N	Q	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T								S	S				S												S	T	T				T	T	S			S	S			S					S				T	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	G	Q	N	Y	V	N	F	K	T	F	V	D	R	M	H	A	N	L	P	R	D	P	Y	V	D	P	M	A	P	L	P	R	S	G	P	E	I	S	I	E	M	I	L	Q	A	A	Q	P	K	I	Q	P	F	P	F	Q	E	H	T	D	L	P	V	G	P	T	G	G	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	T	T					S	S	S	S																		G	G	G	S	S	S									S	S		S	S				S	S			S
	.	.	.	.	.	.	.	.	.	500
Sequence	G	G	Q	A	E	G	P	T	C	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S

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PDB structure

FASTA sequence

Hidden Markov model

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