Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: d1b1xa2

Fold library idFoldSuperfamilyFamily
d1b1xa2Periplasmic binding protein-like IIPeriplasmic binding protein-like IITransferrin


Added to library: Tue Mar 16 13:34:08 2010
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TAAEVAARRERVVWCAVGPEEERKCKQWSDVSNRKVACASASTTEECIALVLKGEADALNLDGGFIYVAG
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
SSTTSSSSTS

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence KCGLVPVLAENQKSQNSNAPDCVHRPPEGYLAVAVVRKSDADLTWNSLSGKKSCHTGVGRTAAWNIPMGL
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) TT
S
SS

SGGGGGS



SS

S

GGG
TT

S
TT
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LFNQTGSCKFDKFFSQSCAPGADPQSSLCALCVGNNENENKCMPNSEERYYGYTGAFRCLAEKAGDVAFV
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)



GGGTSSS
TTS
TTSTTBSS


STTS
STT
SSTTSTT
TTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence KDVTVLQNTDGKNSEPWAKDLKQEDFELLCLDGTRKPVAEAESCHLARAPNHAVVSQSDRAQHLKKVLFL
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) TTSTTSS
ST

TTS
TTS
GGGGGGS
S



TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence QQDQFGGNGPDCPGKFCLFKSETKNLLFNDNTECLAELQGKTTYEQYLGSEYVTSITNLRRCSSSPLLEA
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) STT
TT

TT
STTS

SS
TT

TT

S
TT


 ......
Sequence CAFLRA
Predicted secondary structure


SS confidence





Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg  
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D