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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8s9pB_

Fold library idPDB HeaderMoleculeTitle
c8s9pB_3.80PDB header: signaling proteinChain: B: PDB Molecule: low-density lipoprotein receptor-related protein 4;


Added to library: Sat May 20 09:45:32 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST
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Known secondary structure (DSSP)


SS

TTT

B

SB
S
S
TTTTTTTTTTS



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGTIYWTDWGNTPR
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Known secondary structure (DSSP) S
S


TTTTTTTT
TTS
S

TT


TTTT
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV
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Known secondary structure (DSSP) TTS
S

SS
S



TTTTTTTT
TTS
S

SS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQ
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Known secondary structure (DSSP) TTSSS


SSS





S

S
S




TTTS




TTGGGGGG
SSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NYTCACPTGFRKISSHACAQSLDKFLLFARRMDIRRISFDTEDLSDDVIPLADVRSAVALDWDSRDDHVY
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Known secondary structure (DSSP)
STT



SSS


SS


SS
SSSS





SS
S
TTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence WTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWENL
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Known secondary structure (DSSP) SSS


SSS
S

SS
S



TTTT

SSS

TTS
S

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence DRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIE
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Known secondary structure (DSSP) S
TTTT
SSS


TT
TT

SS
S
TTTTTTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence FAGLDGSKRKVLIGSQLPHPFGLTLYGERIYWTDWQTKSIQSADRLTGLDRETLQENLENLMDIHVFHRR
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Known secondary structure (DSSP) TTS
S

SS
SSB


TTTTTTSSS






TT

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence RPPVSTPCAMENGGCSHLCLRSPNPSGFSCTCPTGINLLSDGKTCSPGMNSFLIFARRIDIRMVSLDIPY
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Known secondary structure (DSSP)





GGGTGGGG
SSB




TTTS


B
STT

B
SSSSSB
SS
SSS
SSSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence FADVVVPINITMKNTIAIGVDPQEGKVYWSDSTLHRISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKV
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Known secondary structure (DSSP)




SS

S



TTTTTTTTTTS
S

TT
S



SSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence YWTDTGTNRIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRAVLINN
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Known secondary structure (DSSP) TTTTTT

S

SS


B


TTTTB
STT


TTS


S
 .........780.........790.........800.........810.........820.........830.........840
Sequence NLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVSPVQHPYGLTLLDSYIYWTDWQTRSIHRA
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Known secondary structure (DSSP) S
S


TTTTTTTTTT

S



S




TT

SSS


 .........850.........860.........870.........880.........890.........900.........910
Sequence DKGTGSNVILVRSNLPGLMDMQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQLKGDGKTC
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Known secondary structure (DSSP) SSS








S


TTS




SS
SGGGG
SSTT

TT

B
TTSSSB
 ....
Sequence DPSP
Predicted secondary structure



SS confidence



Known secondary structure (DSSP)
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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