Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8oghA_

Fold library idPDB HeaderMoleculeTitle
c8oghA_1.60PDB header: transferaseChain: A: PDB Molecule: 1-deoxy-d-xylulose-5-phosphate synthase;


Added to library: Sat May 13 09:26:14 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GMLQQIRGPADLQHLSQAQLRELAAEIREFLIHKVAATGGHLGPNLGVVELTLALHRVFDSPHDPIIFDT
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)

GGG

SGGGGTT




TTS
TTTS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GHQAYVHKMLTGRSQDFATLRKKGGLSGYPSRAESEHDWVESSHASAALSYADGLAKAFELTGHRNRHVV
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP) STT
TTTTGGGGGGTTSTTS

SS

TTT
TT






TT
TT

S

 .........150.........160.........170.........180.........190.........200.........210
Sequence AVVGDGALTGGMCWEALNNIAASRRPVIIVVNDNGRSYGGGPQLLFTDLGLKYVGPVDGHDERAVEVALR
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) TTGGGST

S

SS





SS

SSSSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SARRFGAPVIVHVVTRKGMGYPPAEGPGWTATFSDALIGYAQKRRDIVAITAAMPGPTGLTAFGQRFPDR
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)
S


TTTT
TTT


B
TTSS
TTTTT

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence LFDVGIAEQHAMTSAAGLAMGGLHPVVAIYSTFLNRAFDQIMMDVALHKLPVTMVLDRAGITGSDGASHN
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)

S
TT


GGGGGGGTTTTTT



S
B


TT
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GMWDLSMLGIVPGIRVAAPRDATRLREELGEALDVDDGPTALRFPKGDVGEDISALERRGGVDVLAAPAD
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) B
STTSTT


SST

SS


SSB






STT


T
 .........430.........440.........450.........460.........470.........480.........490
Sequence GLNHDVLLVAIGAFAPMALAVAKRLHNQGIGVTVIDPRWVLPVSDGVRELAVQHKLLVTLEDNGVNGGAG
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) T




GGGTT


SS

TTSSSTTS
 .........500.........510.........520.........530.........540.........
Sequence SAVSAALRRAEIDVPCRDVGLPQEFYEHASRSEVLADLGLTDQDVARRITGWVAALGTG
Predicted secondary structure




















SS confidence


























































Known secondary structure (DSSP) TT




SS


S

TT
STTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D