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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8iubA_

Fold library idPDB HeaderMoleculeTitle
c8iubA_1.18PDB header: hydrolaseChain: A: PDB Molecule: candidate dextranase glycoside hydrolase family 66;


Added to library: Sat Jun 17 14:02:45 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KITLKTDKASYKPGETVNFTADKVFNSSLIRYTHLGKVIKEETFSGTSWSWLPPSDDFQGYMVAIYQTNT
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Known secondary structure (DSSP)


SSS
B
TT

S


SSTT


S


S
SS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence DGTQTILGTVGIDVSSDWAKFPRYGFLSEFGNISESDRAAVIDNLKDYHINGIQFYDWQYRQHQPLAGTV
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Known secondary structure (DSSP) TS

SSTTSS




SS

TT


S
SSBTTB
SSB
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SNPMPVWNDIINREVYGSTVSGYIAQAHSKNMKAMFYNLAYGVLNDYDPNLIKQQQFVYKDANHNDKDKH
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Known secondary structure (DSSP) SSB
S
TTS
TT
SS
TT

TTTS
GGGB
BSSTTS
SB
 .........220.........230.........240.........250.........260.........270.........280
Sequence ELGWPFISNIYITDPANTAWQNYLAQKNDDVYKVYDFDGFHIDQLGDRGNVFRYDGTNADLKNAFPSFIS
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Known secondary structure (DSSP)


TT
S

B
TT
S

S





S
B
TTSSB

GGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence AMKSANTNKKLVMNAVNQYGQKEIAGKELDFLYTEVWSPNEGFKDLTQVLTDNAAYSNNSKNTVLAAYMN
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Known secondary structure (DSSP) TTTSTTTTTTSS
SS

TT

BTTT




TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YNKANNQGMFNTPGVLLTDAVIFAFGGSHLELGEHMLGKEYFPNKNLSMSAELKSSLLEYYDFMTAYQNL
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Known secondary structure (DSSP) TTGGGSS

TT


BSSSB
SSSSTT




T
 .........430.........440.........450.........460.........470.........480.........490
Sequence LRDGGTYTNPTIATGDGKLNLGSWPPTMGKVAAVGKQVGSREIIHLLNFTNANSLNWRDTDGTQNVPDLI
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Known secondary structure (DSSP) SSS



SSSSS

SS

TTSTT
TT
S

BTT
TTS






 .........500.........510.........520.........530.........540......
Sequence KQAMLNLNHSGKVTKIWYASPDYNGGAAVELSFSQNGEKVNFKVPVLQYWAMIVVE
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Known secondary structure (DSSP)
SS



BTTBGGG



TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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