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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8ipqD_

Fold library idPDB HeaderMoleculeTitle
c8ipqD_3.50PDB header: transport proteinChain: D: PDB Molecule: component linked with the assembly of cytochrome' abc


Added to library: Sat Jun 17 14:59:21 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HDPLLRLTLELLRPRLGRFLLAAALGVLSLGSALALAGISAWLITRAWQMPPVLDLTVAVVAVRALGISR
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Known secondary structure (DSSP)

TT


S


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVLGYCQRLASHDSALRAAANARTGLYRKLADAPPDEAMRLPSGELVARLGPAVDELADVLVRALLPIVV
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Known secondary structure (DSSP) T

SS

TTTTS
TTTTSST
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVVLGCAAVGVIAVISPASAAVLAVCLVVAGVVAPALAARAAHASETVAAEHRSQRDTAGMLALEHAPEL
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Known secondary structure (DSSP)
TTTTTTTTTTTTTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RVSGRLDSVIATFERHHRAWGEAADRAAAPAAVAAAMPTAAMGVSVVGAVIAGIALAPTVAPTTAAILML
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Known secondary structure (DSSP) TT
TTTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LPLSAFEATTALPDAAAQLMRSRVAARRLLELPDVATVDLAPGDRLAVVGPSGSGKTTMLMAIADRLNGA
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Known secondary structure (DSSP) SGGGS
TTGGG
SS









TT


B

TTS
TS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GGETPQRAAVFAEDAHLFDTTVRDNLLVVRGDATDTELVAALDRVGLGEWLAGLPDGLSTVLVGGAAAVS
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Known secondary structure (DSSP) SS
SS


SS



SS
SSS
S


T
T
TTGGG


TTGGGGS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AGQRRRLLIARALISAFPVVLLDEPTENLDAGDARQMLEGLLTPGALFAADRTVVVATHHLPPGFDCPIV
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Known secondary structure (DSSP)


SSTTTT

TTTSTTTSS
SS
BS


SS

S


 ...
Sequence RCT
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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