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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8iicB_

Fold library idPDB HeaderMoleculeTitle
c8iicB_3.25PDB header: transferaseChain: B: PDB Molecule: polymerase polyprotein;


Added to library: Sat Jun 10 08:54:32 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TDIRPSLVHGQISDIKTKPAYLRNVIKDKCAMDTPYIDKDMIDEAYQLTKSVWLKGMRDELKKVLTYEEA
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Known secondary structure (DSSP)


TTTT
S


SS






TTTTTTT

GGG
S


 .........80.........90.........100.........110.........120.........130.........140
Sequence ICGSEVSEYISSIEGEYILNEDVRLAVQQRIQAAREGKRLPVMWVNGPMDFSIAFRMYYLGFIAHLMENR
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Known secondary structure (DSSP) T

SS
TTS



TTTTT
TT









TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ITNEVSIGTNVYSQDWSKTVRKLTKFGNKVIAGDFSTFDGSLNVCIMEKFADLANEFYDDGKENNLIRHV
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Known secondary structure (DSSP) TTTSB
TT

TTSTSSS
S
S

TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence LLMDVYNSVHICNDSVYMMTHSQPSGNPATTPLNCFINSMGLRMCFAICAKNAGIKMTMKDFGKHVSMVS
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Known secondary structure (DSSP) GGG




TTS
SS



TTTT
S

GGGGGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YGDDNVINFSDEVCEWYNMETIAKAFETLGFTYTDELVPKWRSIKDVQYLKRKFRYDEQRKVWEAPLCMD
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Known secondary structure (DSSP) TT
TGGGGTSST



S
B
TTT
TT
TTTT

B
 .........360.........370.........380.........390.........400.........410.........420
Sequence TILEMPNWCRGGLDIQEGTKLNCENAIMELSMHEESVFDTWSKIIDRAYANATGDHLDINTYRGYAQERF
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Known secondary structure (DSSP) TSTTTTS
TTS
SS





 .....
Sequence LEYYM
Predicted secondary structure
SS confidence




Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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