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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8i03B_

Fold library idPDB HeaderMoleculeTitle
c8i03B_3.20PDB header: dna binding proteinChain: B: PDB Molecule: paired amphipathic helix protein pst3;


Added to library: Sat May 6 08:56:57 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TAPTSPYAATQEELLAFTTIRQHLPDTLAFHKFLELLHLYREKLLDKTELLNSFSKLVRNDNLTLWFSEF
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Known secondary structure (DSSP)




TT


S
STTSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence IRWSDNPILVKNEPVDERVYLPETFECISLTYRKLPDSWKQDKCSGRDDLDNSVLNDDYISVAPKPSHVK
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GGGTGGGGS
BSSSS


GGGS



TT

TTS

S









 .........150.........160.........170.........180.........190.........200.........210
Sequence NIMHHENQYLQALQLVEDERYDYDRVLNTTESAIKILANFCEPTIHEHLETALQELERSKRIIKNALIIV
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Known secondary structure (DSSP) S





TTT
SGGGGTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YGKEHANLALDTLFKKLPTAAPVLLKRIKTKDQEWRRSKREWSKIWRQIEKKNAQAAFDDRYCRIEGRDR
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Known secondary structure (DSSP) T
TTSTT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RGLSYSRILRDIDDIYQRQKHRIDGAKLGFQFTQVLCDSLIFLNILRLSDAQLTNSSFYSYADKGRISAV
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Known secondary structure (DSSP) S
TTTTS

SS
S


STT
SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LKALLSQFFGIPLLGEESKNIIGYNFFGNATMYVLFRLICVCYSRLEHIKLFVESSTIYASSTGGYENIL
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Known secondary structure (DSSP) T




STS

STTTTTSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NICEKYLKGSCSRLEFRKYLQKFNNETCYMICSIERLLKVIFYRIHEILLDPKLGQLLLLFESDGANSVT
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Known secondary structure (DSSP) TTSS
GGG

TTTT
TTTTS
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence TPREQMVYRNHVESILAPESKIFNMRWYPLEKRLCIQQLLPADLTMHDFENPAKAFMYYVDSYAISHITE
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Known secondary structure (DSSP)
S
TT

TTTT
TT

S



SS
SS
T
 .........570.........580.........590.........600.........610.........620.........630
Sequence GVDLMQVKMPFLRREHFCKSNLQLFFSTDTYVIFFEPNTENVYINSYDQSSQSKKQNRTTNWRRWLEANT
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Known secondary structure (DSSP) T

TTT


SS







B



SSS


SS

B








 .........
Sequence DIKFFSETT
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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