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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8i02A_

Fold library idPDB HeaderMoleculeTitle
c8i02A_2.90PDB header: dna binding proteinChain: A: PDB Molecule: paired amphipathic helix protein pst2;


Added to library: Sat May 6 08:55:23 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DIKAFVQKLGQRLCHRPYVYSAFMDVVKALHNEIVDFPGFIERISVILRDYPDLLEYLNIFLPSSYKYLL
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Known secondary structure (DSSP)
TTTSS
TSS
SSS
TTTS
TT



 .........80.........90.........100.........110.........120.........130.........140
Sequence SNSGANFTLQFTTPSGPVSYVATYNDLPCTYHRAIGFVSRVRRALLSNPEQFFKLQDSLRKFKNSECSLS
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Known secondary structure (DSSP) TTTT
SS







S
SSTTTTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence ELQTIVTSLLAEHPSLAHEFHNFLPSSIFFGSKPPLGSFPLRGIQSSQFTLSNISDLLSQSRESSDFFKN
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Known secondary structure (DSSP) TTS
TTTTTTGGGSSTTTTTS
SS

TT


SS


TT
SS


TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence VKNVLTDVETYHEFLKLLNLYVQGIIDRNILVSRGFGFLKSNSGLWRSFLSLTSLSPEEFLSVYNSACSD
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Known secondary structure (DSSP)

STSS
STTTS
SSTTTT

TTTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence FPECGPSYRLLPVEERNISCSGRDDFAWGILNDDWVSHPTWASEESGFIVQRKTPYEEAMTKLEEERYEF
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Known secondary structure (DSSP) STTT
SS


TTGGG


TT

STTTTTS

S




SSS
SS






TTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DRHIEATSWTIKSLKKIQNRINELPEEERETYTLEEGLGLPSKSIYKKTIKLVYTSEHAEEMFKALERMP
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Known secondary structure (DSSP) TTS
TTTGGG



SS
S
TTTTGGG
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence CLTLPLVISRLEEKNEEWKSVKRSLQPGWRSIEFKNYDKSLDSQCVYFKARDKKNVSSKFLLAEADILRS
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Known secondary structure (DSSP) TTTTTGGGS

T
 .........500.........510.........520.........530.........540.........550.........560
Sequence QAKLHFPLRSRSAFEFSFVYDNEIVLFDTCYMVCTYIVCNSPSGLKKVEHFFKNILPLHFGLEKDKFSIF
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Known secondary structure (DSSP)
SSTTSS

SB

B




S
SSS
B
SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence LDQVFRGPIKASLKYPSHPDSLLEHDVDKEQFGYSSMYVFFRLFNLLYERLYELQRLEDQVSIIQQRIIP
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Known secondary structure (DSSP) TS



SS






S

B



S


TTSTTTSSSTT

 .........640.........650.........660.........670.........680.........690.........700
Sequence NPVSQKQKIWRDRWNDLSDVPDEKTHYENTYVMILRLIYGIVDQSAFEDYLRFYYGNKAYKIYTIDKLVW
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Known secondary structure (DSSP)
GGGGSSS



STTS






SSTSS
TTS
TTSTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence SAAKQVHHIVSDGKYKFVTSLVEQNSSYDDFLYRLEIEKLLNPDEILFRFCWINKFKSFGIKIMKRANYK
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Known secondary structure (DSSP) TTTT
TTTTT

SS



SSTTTTB




 .........780.........790.........800.........810.........820.........830.........840
Sequence NYRCPFLCRNIEKERTVEQLVSRLQTKLLRSAELVSGLQAKLCLDSFKLLYLPRTEDSYIDASYLRLRDT
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Known secondary structure (DSSP)



SS
TTTT


SSST
S




B
TTS

B


TT


TTGGG

SS
 .........850.........860....
Sequence DFLDCQNKRKQRWRNRWESLLKSV
Predicted secondary structure

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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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