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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8hslB_

Fold library idPDB HeaderMoleculeTitle
c8hslB_5.80PDB header: transcriptionChain: B: PDB Molecule: transcription termination factor rho;


Added to library: Sat May 6 08:49:07 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLVKGYLEISQDGYGFLTENLHNLESRVAIVSAGLIKQYALRAGDYVVGQARPPRENERYATLLKVEAVN
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Known secondary structure (DSSP)

TTS

TT
S

TT

T

TT



TT

S




T
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLDPEAAKNRPRFDELTPQFPDRQIRLETTPDELSTRVIDLLAPIGRGQRGLIVAPPKAGKTTLLKKIAN
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Known secondary structure (DSSP) TB
TSS

GGGS



S



GGG

TT

SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVLKNEPDIKVIVLLIDERPEEVTDFRESVQGAEVIASTFDEPPQNHIRVAEFVHERAKRIVEEGGHVMI
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Known secondary structure (DSSP)
TTS
TTT

TTS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLDSITRLARANNLVTPPTGRTLSGGLDSAALYFPKRFLGAARNIRGGGSLTILATALVETGSRMDDVIF
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Known secondary structure (DSSP)




SSB
TTS
BTTTTT
TTS

SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EEFKGTGNMELHLSRRLEERRIFPAIDILKSGTRREELLLGEEVTHKMWLLRKVLADMDPAEAMEMLLAR
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Known secondary structure (DSSP) TT
S
TT
SS
S
GGGTS
TS
 .........360.
Sequence LARTKNNKEFL
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Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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