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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8hr9M_

Fold library idPDB HeaderMoleculeTitle
c8hr9M_3.03PDB header: immune systemChain: M: PDB Molecule: archaeal atpase;


Added to library: Sat Feb 4 19:40:55 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSIAYGRNVFFVDGTRGAGKTTFINSVVKSLNSDQD
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Known secondary structure (DSSP)
TTS


STT

TT

S

TT





TTS
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DVKVNIKCLPTIDPTKLPRHEPILVTVTARLNKMVSDKLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLT
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Known secondary structure (DSSP) TSSS



B
TTTS
TT

TT
S
TTGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DKEYKPEYFSDALKLDAQLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWDVLESIR
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Known secondary structure (DSSP)
SS

GGG



TT

SSSS

T
S


TT
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence KFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVRLAERGYMVEHLEQQYLLKLFPVQKRI
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Known secondary structure (DSSP)

STT
TTTS



S
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence QLKTMLQLVGEKGKAGKEEIKVKTEPGMQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRL
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Known secondary structure (DSSP)




SSS

S


STT

TTT
T

SSTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LMQVLQDFYTKKYHATSLSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKDIFTYVKQDRDFNTG
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Known secondary structure (DSSP) TT


TT



GGG
S

TTTG
 .........430.........440.........450.........460.........470.........480.........490
Sequence FYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQMLLVGCGSVSIFNQFVTELAEKFEQLISEYVAYM
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Known secondary structure (DSSP) GG

TT
SSTTT
STTT


 .........500.........510.........520.........530.........540.........550.........560
Sequence SVGRIESASHWANRCCAVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGLAKAAMASSLS
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Known secondary structure (DSSP) TTTS
S
S

STT
SB
SSB
SS

SS

TT




TTSS
TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence TVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKVIAQTTCIVPPWSEATEFSDAITKVEQWLKN
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Known secondary structure (DSSP) BSSS
TTS
SSTSSSSSS


B

SSS


 .........640.........650.........660.........670.........680.........690.........700
Sequence VNEIEIGIRPSALLIGKVWSRFYFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRFNVLAFLHAVLVE
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Known secondary structure (DSSP) GGG



TTTTTT


TT
TTB
SSS


 .........710.........720.........730.........740.........750.........760.........770
Sequence ESLYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEKLKADNKTWKNTHPLFFLLISCPILHPFIFPVG
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Known secondary structure (DSSP) S
SS
SS
SS
SS




SS
STT

TTTS
T
TTTS
SS
 .........780.........790.........800.........810.........820.........830.....
Sequence GINCSVKALNKETSFNKLIDEIVGDKLLSDEEWDYLTKNQQIFQNTITSLNSSTIVGASYDKDTP
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Known secondary structure (DSSP) B


STTTSSS
SS
T





TTS

STTT

BTT








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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