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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8hpoK_

Fold library idPDB HeaderMoleculeTitle
c8hpoK_2.60PDB header: dna binding proteinChain: K: PDB Molecule: transcriptional regulatory protein ume1;


Added to library: Sat May 6 09:01:29 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence STLDIAEDNKIKNEEFKIWKKSIPSLYQHISSLKPIFGSGVDESPSTLRSIVFTNDSSCNKSKGVLSVPL
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Known secondary structure (DSSP)
T


B
TT



TT


S

TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LYSQGSEIFEVDCIVPLGLHYYTMESQKVEQTVLIPKWEFKGETIAKMIYVDNSEINVKVIALSTNGSLA
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Known secondary structure (DSSP) TTGGGT

S
B

S
TT




BTTTTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence WFREGVKSPVYTMMEPSTPCVDFAISNDSKTLTVTKEKHENATIKLIDNSGKIGEVLRTIPVPGIKNIQE
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Known secondary structure (DSSP) TT
SS
S









TTS






SSSTTSTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence IKFLNNQIFATCSDDGIIRFWGNEIGKKPLWILNDSLDGKTTCFAASPFVDTLFMTGTSGGALKVWDIRA
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Known secondary structure (DSSP) SSSSBTT

BSSS
SS
S

TTS

SS
SSTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VIALGDADAELNINQGHNKVNELFKVHHFYSEQVSKIEFSSISPMEVVTIGGLGNVYHWNFEPVFAIYNE
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Known secondary structure (DSSP) T

TTS


TTS






S
GGG




SS
SS
TTS

TT
 .........360.........370.........380.........390.........400.........410...
Sequence IIISDELEAESMAFYHTEGCRREIGENNKVNTVAYHKYIEDLVATVDSDGLLTVYKPFTGKVL
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Known secondary structure (DSSP)




GGGTS


SS

SSS
SSSTT

TT








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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