Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8hmyE_

Fold library idPDB HeaderMoleculeTitle
c8hmyE_2.94PDB header: rna binding protein/rnaChain: E: PDB Molecule: polyribonucleotide 5'-hydroxyl-kinase clp1;


Added to library: Sat Apr 22 12:02:21 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PTTKFELERETELRFEVEASQSVQLELLTGMAEIFGTELTRNKKFTFDAGAKVAVFTWHGCSVQLSGRTE
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)

TT
TT



TT

BT

TT
SS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVEL
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) S

TTT




STTS
TT



 .........150.........160.........170.........180.........190.........200.........210
Sequence DVGQGSVSIPGTMGALYIERPADVEEGFSIQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRR
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)
TTT
SSSSTT

S

BTTTBS


S


SSSGGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence ASVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSK
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)


S

STTT
SS
S
TTS


TT




 .........290.........300.........310.........320.........330.........340.........350
Sequence DFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVLVPVTPGRDMVHHLLSVSTSVAGFIVVTSVD
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)
GGG



GGG






GGGTT

 .........360.........370.........
Sequence LEHQVFTVLSPAPRPLPKNFLLIMDIRFM
Predicted secondary structure













SS confidence




























Known secondary structure (DSSP) TTTTSS
SS
S
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D