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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8hmeA_

Fold library idPDB HeaderMoleculeTitle
c8hmeA_4.20PDB header: protein transportChain: A: PDB Molecule: intraflagellar transport protein 122 homolog;


Added to library: Sat Jun 17 13:25:52 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NSDASRKDLLIQRAEWEVKQGNWKKGGELYIQAEVYKKAIEVYVTNNFSEGIVEVCRNADAETQRKEIEQ
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Known secondary structure (DSSP)


TTS
ST
S
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence CAAYFKKAKLHQYTKEAYLKLQDNKALLQLNIDLEKWDEAMTLAKAHPEFMEIVKLPYANWLAKQDRYEE
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Known secondary structure (DSSP) TT
T
TT
S
TT
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SLKAYRKIGKHDMATKMLYNLSQNAVFEKRFSDAALFTWMIATEHLGLIRNMKAPTPEDIENLMKFYQYR
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Known secondary structure (DSSP) S

TT
TTS

S

 .........220.........230.........240.........250.........260.........270.........280
Sequence DDAEIYFAYSKVQSFVDEPFLPLSGHAYMLNIFNAARFAINKLGNRQLYGVQHSYLYYSLGKVSKQLEGY
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Known secondary structure (DSSP) S


SS

TT


TT

SST

 .........290.........300.........310.........320.........330.........340.........350
Sequence KTARICYEKLASYKIPTEWSEEIELSTLLIRSKPYSDQESLLPICNRCYNQNPALTEGNRCSSCMHQFQN
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Known secondary structure (DSSP) S


TTTTS
SS

SS
S
TTTT

S

TTTB
SSS

B

 .........360.........370.........380.........390.........400.........410.........420
Sequence CFISFENLPLVEFKLDPKITHKRFIELINSDKSKTQPNKKKKKANDGWQESHQGDQQVLTFNNSPQKGGN
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Known secondary structure (DSSP) TTTT


SSS
TTT

S





SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence DNESSPFLDKLNEVFEIQQTTQEYIPVTLDENIVSSLSIDEVYWVDYTKYCYTAEIKYYKSMLTDIPLKN
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Known secondary structure (DSSP)




TS






SSSB


TTT
TTS
S
SSS
 .........500.........510.........520.........530..
Sequence CQECGTFYILDEYEFEISKTQKCPFCRSVDERAGPQKDVFDF
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Known secondary structure (DSSP) TTTT
SB
TTT

B
SSS




TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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