PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c8hmdC_

Fold library id	PDB Header	Molecule	Title
c8hmdC_	4.70	PDB header: protein transport	Chain: C: PDB Molecule: tetratricopeptide repeat protein;

Links to external resources
Added to library: Sat Jun 17 15:15:41 2023

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M Q N Q Q Q K M Q T I L I A Q S Q V Y Y Y I R E G F W S T M Q R F C Q E Q Y K A F G D P F F I F W K A Y G L Y Q E G L P N E A I N E L T S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q H K K E I Q Y A T I V A L I T Y H L S T N I V D R E T V Q N L K F E E S T Q R R L S S D K A I C L A A F F Y A F N K E H A K A R D L I D E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G S S S
T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I H S D N F N I R I A S A W C Y L L E G G K F L E K S V Q L F E E L Y N E Q H E I N K N L E S L M G R S K A N E M I K K F D I S L N T I N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence I N V L Y P D F K G G L I E K A K L L M T V D D W E Q L V D Y C N K I L Y D D D K N I M A L M L L T F Y T F A R E G D I E T G C E R L Q K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence I Q A V E F S E S R N M Q L M F K I S Q V F S R I S G R N T Q I L K F T M K L V N Q C K Q L S P L N A Q Y F C E L A Q Q L L M V N Q F E R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
S
T T
T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence E Q Y F Q E A S A I D V D N K E C L M G L I L S K I M Q G Q T E D A E S Q I D F I N Q T T N N G E R T S E I A Y L E A L V S T K Q E N V D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T T S
S S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence R V T I K L L E E S L K L H I A Q A N R L Y P S F D F Y I V L N P D F L M S L S Q A Y F F Q V G M K E M L A G K Q P Q N G V A S K G T K L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
T S
T T
T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence D F I I K K I P G L I P A Y L L Q A K G K M S M G N T Q E A L K S V T K V I E Q D P K N E E A Y I L S A M I A S S S K N F S L A Q N Q L Q Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence A L S N N F M I R D N P L F M L V K G E V E Y A Q G S Y Q A C L E T M K A A Y E I P E V K D K A N Q S K V V S A M S V L Q F S D K D R C S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G G
T T
T T S S S S T T T
S
S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence F L L Y A K A L Q Q N N N S K E A K K I M T Q A I S Q F T G T T E E V N V L I A N S E I A L Q S G D V K K A I S I L K G V P Q E S P Y F L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T S T T
S S
T T
T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence A R Q I L A D V Y L D Q L R D R R N Y A K C Y A D L I E I D P S F D N Y K M L G D A L M K I R E P E E A S R A Y E K A A L I K P D D E Q I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S S T
S S S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence Q L L G L S L C Q T H D Y N K A L T Y Y E N A L R M N P K R L D L I I D L G K L C I Q I K N F N R A E E I L K P D I F S D E Y Q L P T Y Q N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T
S
T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence L K R N Q E G F Y L I A K L N I K R T P P G V F T P I D M Y R K A L K K S I Q I Q I D V I E K A K Q E G E D V E K E R K T L A D M Y I E L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence K Y T N Q Y E K N E K A T L D I L A E A S K Y T N N Q D T M S K T V G N Q E K I L E L E V Q M Y F K S N Q K L E C E N K C N L L L K L N P N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S T T T T T S
T
T T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence N D L A C L T L A E L L L Q K D E Y S Q A I E Q F K K I L Q D R P N N Y G I L A K L I D F F R R S F Q I N E A K T Y I E R A E K K A T N T N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S S S S S
T T
T
S S S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence D P G L C Y C R G L Y H K Y N R S P K D A L N E F S K A K K S S Q Y A E E S L V N M I D I Y L N P D Q D L Y Y S N V E E G P K V V D E V N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T S S S S S
S S
S S
S S S
S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence R A C E S L L R E M Q I R A S Y L R Y I V M E S Y V F F L G G P R Y K G G L E Q G L K N L N D I L K T N N D Y I P A M L A L A V G K F I Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
S T G G G T S S
S
T T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence K S T D A K N L L K L L W K R Q Y T T E Y G E D L E R A W L L S A D S F I A I Q K Y D S A E E I L K K C L K Y N Q S C G K A E E Y M G L I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S T T S S S
S
S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence E K E Q S Y V D A A T H Y E K A Y K L T N E K S A S I A F R L S F N Y L K A K R Y V D C I N I C K K I L V L F P N Y P K I E K D C L E K A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T
S T T
S
T T T

. . . .

Sequence Q A L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	Q	N	Q	Q	Q	K	M	Q	T	I	L	I	A	Q	S	Q	V	Y	Y	Y	I	R	E	G	F	W	S	T	M	Q	R	F	C	Q	E	Q	Y	K	A	F	G	D	P	F	F	I	F	W	K	A	Y	G	L	Y	Q	E	G	L	P	N	E	A	I	N	E	L	T	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T																																T	T											T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	H	K	K	E	I	Q	Y	A	T	I	V	A	L	I	T	Y	H	L	S	T	N	I	V	D	R	E	T	V	Q	N	L	K	F	E	E	S	T	Q	R	R	L	S	S	D	K	A	I	C	L	A	A	F	F	Y	A	F	N	K	E	H	A	K	A	R	D	L	I	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		G	G	G															S	S	S																																			T	T											T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	H	S	D	N	F	N	I	R	I	A	S	A	W	C	Y	L	L	E	G	G	K	F	L	E	K	S	V	Q	L	F	E	E	L	Y	N	E	Q	H	E	I	N	K	N	L	E	S	L	M	G	R	S	K	A	N	E	M	I	K	K	F	D	I	S	L	N	T	I	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					G	G	G															S		T	T																	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	I	N	V	L	Y	P	D	F	K	G	G	L	I	E	K	A	K	L	L	M	T	V	D	D	W	E	Q	L	V	D	Y	C	N	K	I	L	Y	D	D	D	K	N	I	M	A	L	M	L	L	T	F	Y	T	F	A	R	E	G	D	I	E	T	G	C	E	R	L	Q	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S															T	T																																	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	Q	A	V	E	F	S	E	S	R	N	M	Q	L	M	F	K	I	S	Q	V	F	S	R	I	S	G	R	N	T	Q	I	L	K	F	T	M	K	L	V	N	Q	C	K	Q	L	S	P	L	N	A	Q	Y	F	C	E	L	A	Q	Q	L	L	M	V	N	Q	F	E	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T															S	S		S																				T	T															T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	Q	Y	F	Q	E	A	S	A	I	D	V	D	N	K	E	C	L	M	G	L	I	L	S	K	I	M	Q	G	Q	T	E	D	A	E	S	Q	I	D	F	I	N	Q	T	T	N	N	G	E	R	T	S	E	I	A	Y	L	E	A	L	V	S	T	K	Q	E	N	V	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T															T	T																T	T	T	S																		S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	V	T	I	K	L	L	E	E	S	L	K	L	H	I	A	Q	A	N	R	L	Y	P	S	F	D	F	Y	I	V	L	N	P	D	F	L	M	S	L	S	Q	A	Y	F	F	Q	V	G	M	K	E	M	L	A	G	K	Q	P	Q	N	G	V	A	S	K	G	T	K	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	S			S																						T	S							T	T				T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	F	I	I	K	K	I	P	G	L	I	P	A	Y	L	L	Q	A	K	G	K	M	S	M	G	N	T	Q	E	A	L	K	S	V	T	K	V	I	E	Q	D	P	K	N	E	E	A	Y	I	L	S	A	M	I	A	S	S	S	K	N	F	S	L	A	Q	N	Q	L	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T															T	T																	T	T															T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	L	S	N	N	F	M	I	R	D	N	P	L	F	M	L	V	K	G	E	V	E	Y	A	Q	G	S	Y	Q	A	C	L	E	T	M	K	A	A	Y	E	I	P	E	V	K	D	K	A	N	Q	S	K	V	V	S	A	M	S	V	L	Q	F	S	D	K	D	R	C	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	G	G	G	G															T	T												T	T	S	S	S	S	T	T							T			S				S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	L	L	Y	A	K	A	L	Q	Q	N	N	N	S	K	E	A	K	K	I	M	T	Q	A	I	S	Q	F	T	G	T	T	E	E	V	N	V	L	I	A	N	S	E	I	A	L	Q	S	G	D	V	K	K	A	I	S	I	L	K	G	V	P	Q	E	S	P	Y	F	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T																S	T	T	S																	T	T											S	S		T	T		T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	R	Q	I	L	A	D	V	Y	L	D	Q	L	R	D	R	R	N	Y	A	K	C	Y	A	D	L	I	E	I	D	P	S	F	D	N	Y	K	M	L	G	D	A	L	M	K	I	R	E	P	E	E	A	S	R	A	Y	E	K	A	A	L	I	K	P	D	D	E	Q	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S			S														S			S	S													T																S	S	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	Q	L	L	G	L	S	L	C	Q	T	H	D	Y	N	K	A	L	T	Y	Y	E	N	A	L	R	M	N	P	K	R	L	D	L	I	I	D	L	G	K	L	C	I	Q	I	K	N	F	N	R	A	E	E	I	L	K	P	D	I	F	S	D	E	Y	Q	L	P	T	Y	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T																	S																T	T																		S		T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	L	K	R	N	Q	E	G	F	Y	L	I	A	K	L	N	I	K	R	T	P	P	G	V	F	T	P	I	D	M	Y	R	K	A	L	K	K	S	I	Q	I	Q	I	D	V	I	E	K	A	K	Q	E	G	E	D	V	E	K	E	R	K	T	L	A	D	M	Y	I	E	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S			T	T																													T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	K	Y	T	N	Q	Y	E	K	N	E	K	A	T	L	D	I	L	A	E	A	S	K	Y	T	N	N	Q	D	T	M	S	K	T	V	G	N	Q	E	K	I	L	E	L	E	V	Q	M	Y	F	K	S	N	Q	K	L	E	C	E	N	K	C	N	L	L	L	K	L	N	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S		S	T	T	T	T	T	S																				T																	T	T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	N	D	L	A	C	L	T	L	A	E	L	L	L	Q	K	D	E	Y	S	Q	A	I	E	Q	F	K	K	I	L	Q	D	R	P	N	N	Y	G	I	L	A	K	L	I	D	F	F	R	R	S	F	Q	I	N	E	A	K	T	Y	I	E	R	A	E	K	K	A	T	N	T	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S															S	S	S	S												S	S																T	T															T		S	S	S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	D	P	G	L	C	Y	C	R	G	L	Y	H	K	Y	N	R	S	P	K	D	A	L	N	E	F	S	K	A	K	K	S	S	Q	Y	A	E	E	S	L	V	N	M	I	D	I	Y	L	N	P	D	Q	D	L	Y	Y	S	N	V	E	E	G	P	K	V	V	D	E	V	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T													T	S	S	S	S	S															S	S				S	S		S	S	S								S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	R	A	C	E	S	L	L	R	E	M	Q	I	R	A	S	Y	L	R	Y	I	V	M	E	S	Y	V	F	F	L	G	G	P	R	Y	K	G	G	L	E	Q	G	L	K	N	L	N	D	I	L	K	T	N	N	D	Y	I	P	A	M	L	A	L	A	V	G	K	F	I	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S	S		S														T	G	G	G	T	S	S																	S																T	T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	K	S	T	D	A	K	N	L	L	K	L	L	W	K	R	Q	Y	T	T	E	Y	G	E	D	L	E	R	A	W	L	L	S	A	D	S	F	I	A	I	Q	K	Y	D	S	A	E	E	I	L	K	K	C	L	K	Y	N	Q	S	C	G	K	A	E	E	Y	M	G	L	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	S				S	T	T																	S	S	S																	S			S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	E	K	E	Q	S	Y	V	D	A	A	T	H	Y	E	K	A	Y	K	L	T	N	E	K	S	A	S	I	A	F	R	L	S	F	N	Y	L	K	A	K	R	Y	V	D	C	I	N	I	C	K	K	I	L	V	L	F	P	N	Y	P	K	I	E	K	D	C	L	E	K	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																T	T	T			S													T	T																	S							T	T	T
	.	.	.	.
Sequence	Q	A	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)