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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8hkcE_

Fold library idPDB HeaderMoleculeTitle
c8hkcE_2.49PDB header: transcription/dnaChain: E: PDB Molecule: rna polymerase sigma factor rpoh;


Added to library: Sat Jun 3 16:49:41 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRFVVHIARNYAGYGLPQADL
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Known secondary structure (DSSP)




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TGGGGGG


 .........80.........90.........100.........110.........120.........130.........140
Sequence IQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGW
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Known secondary structure (DSSP) T

GGG


SSSS
S

S

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FNQDEVEMVARELGVTSKDVREMESRMAAQDMTFDVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGL
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T










SSS
TT

S
 .........220.........230.........240.........250.........260..
Sequence DERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
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Known secondary structure (DSSP)
T
SS



T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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