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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8h89C_

Fold library idPDB HeaderMoleculeTitle
c8h89C_3.70PDB header: virusChain: C: PDB Molecule: major capsid protein;


Added to library: Sat Nov 19 14:00:46 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSTVIAFGDPKAQKKWSSELAVDIRKKSYFESRFIGTSENAVIQRKTEVESDAGDRVSFDLSVRLRGQPT
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SSSTT
















SS
TTTSSSSSS
SSSSSS

S










 .........80.........90.........100.........110.........120.........130.........140
Sequence FGDDRVEGKEENLKFYTDEVIIDQVRHSVSAGGRMSRKRTAHDLRKTGRDRLGDYFYQLTDELFFMYLSG
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Known secondary structure (DSSP)
SS


SS












ST
SS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ARGINKDFILPTSFTGYAKNPFNTPDAAHLLYGGVATSKASLANTDTMSRVVIERANVQATMMQAQDPET
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Known secondary structure (DSSP) S

S
SS
SS
TT


STT






GGG
SSS

SGGG

TT



STTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ANMVPVSVEGEDRYVCVMSPFQEHSLRTSDAAGWLEIQKAAAAAEGRNNPIFKGGLGMIGNTVLHSHRNV
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B
SSSSSB

T
SSSS
TTSTTTSSS


BTTB
TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VRFSDYGAGSDQPAARALFMGRQAAVVAYGTKGGLRYDWQEETKDYGNEPTVASGFIAGIKKTRFNDRDF
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Known secondary structure (DSSP)
S

SSSS



TTS


SSSS





TTS
S


STTS

 .........360.......
Sequence GVISIDTYAKDPNPNNP
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Known secondary structure (DSSP) S



S
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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