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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8gp6A_

Fold library idPDB HeaderMoleculeTitle
c8gp6A_2.70PDB header: viral proteinChain: A: PDB Molecule: virion membrane protein a16;


Added to library: Sat May 20 09:17:22 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LNRIKIAPGIADIRDKYMELGFNYPEYNRAVKFAEESYTYYYETSPGEIKPKFCLIDGMSIDHCSSFIVP
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Known secondary structure (DSSP)

SS
SS
SSGGG





BSS
SBTT

S
TT

TTTB
 .........80.........90.........100.........110.........120.........130.........140
Sequence EFAKQYVLIHGEPCSSFKFRPGSLIYYQNEVTPEYIKDLKHATDYIASGQRCHFIKKDYLLGDSDSVAKC
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Known secondary structure (DSSP) TT



TTSTT


TTS

SS







S
 .........150.........160.........170.........180.........190.........200.........210
Sequence CSKTNTKHCPKIFNNNYKTEHCDDFMTGFCRNDPGNPNCLEWLRAKRKPAMSTYSDICSKHMDARYCSEF
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Known secondary structure (DSSP) TS

TT

GGG
STTSSSTT
TT
TT

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IRIIRPDYFTFGDTALYVFCNDHKGNRNCWCANYPKSNSGDKYLGPRVCWLHECTDESRDRKWLYYNQDV
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Known secondary structure (DSSP) TTTTT
TT
GGGTTTS


SS
SSTTSGGGGGGSTTTSSSS

GGGS
 .....
Sequence QRTRC
Predicted secondary structure


SS confidence




Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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