Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8godA_

Fold library idPDB HeaderMoleculeTitle
c8godA_2.88PDB header: hydrolaseChain: A: PDB Molecule: protein-arginine deiminase type-4;


Added to library: Sat Apr 1 12:20:48 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLIRVTPEQPTHAVCVLGTLTQLDICSSAPEDCTSFSINASPGVVVDIAHSSTWPLDPGVEVTLTMKVAS
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)


SSS
TT


STT

SS


TT





TT
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence GSTGDQKVQISYYGPKTPPVKALLYLTGVEISLCADITRTGKVKDQRTWTWGPCGQGAILLVNCDDSEDL
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) SSTT

TTS



TTSSSS



SS


STT



B




SST
 .........150.........160.........170.........180.........190.........200.........210
Sequence QDMSLMTLSTKTPKDFFTNHTLVLHVARSEMDKVRVFQATRKCSVVLGPKWPSHYLMVPGGKHNMDFYVE
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) TTS

TTGGGT
TTTGGG





BTTB




SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ALAFPDTDFPGLITLTISLLDTSNLELPEAVVFQDSVVFRVAPWIMTPNTQPPQEVYACSENEDFLKSVT
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) SS

BTTB
S

SSSS




B


TTS






T
 .........290.........300.........310.........320.........330.........340.........350
Sequence TLAMKAKCKLTICMQDEMEIGYIQAPHKTLPVVFDSPMGPDFGYVISGLDSFGNLEVSPPVTVRGKEYPL
Predicted secondary structure













































SS confidence





































































Known secondary structure (DSSP) TT



GGG
TT




SSS
B


TTSSGGG


STTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GRILFGDSCYPSNDSRQMHQALQDFLSAQQVQAPVKLYSDWLSVGHVDEFLSFVPAPDRKGFRLLLASPR
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)


SS

SS




T
TT


TTBSS

GGGT
SSTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SCYKLFQEQQNEGHGEALLFEGIKKKKQQKIKNILSNKTLREHNSFVERCIDWNRELLKRELGLAESDII
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TTTGGG
T
S
TT


T
TT

GGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence DIPQLFKLKEFSKAEAFFPNMVNMLVLGKHLGIPKPFGPVINGRCCLEEKVCSLLEPLGLQCTFINDFFT
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)


GGG
SS

TTS
TT




BSSSSBGGGT
SS
 .........570.........580........
Sequence YHIRHGEVHCGTNVRRKPFSFKWWNMVP
Predicted secondary structure




















SS confidence



























Known secondary structure (DSSP)

STT







SS
GGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D