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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8gn6B_

Fold library idPDB HeaderMoleculeTitle
c8gn6B_2.10PDB header: carbohydrateChain: B: PDB Molecule: sialidase;


Added to library: Sat Apr 22 11:31:01 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QEVTMWGDSHGVAPNQMYRTLVKVALSESLPPDAKQIRIGFSLPKETEEKVTALYLLVSDSLAVRDLPDY
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Known secondary structure (DSSP)





B
SS
SS
SS


TT



TTSS

SS
GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence KGRVSYDSFPISKEDRTTALSADSVAGRRFFYLAADIGPVASFSRSDTLTARVEELAVDGRPLPLKELSP
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Known secondary structure (DSSP) TTSS

TT

TT








TT


TT


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ASRRLYREYEALFVPGDGGSRNYRIPAILKTANGTLIAMADRRKYNQTDLPEDIDIVMRRSTDGGKSWSD
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Known secondary structure (DSSP)

B
S
TTGGG
S
TT


SSS

TTS
SSSSS



 .........220.........230.........240.........250.........260.........270.........280
Sequence PRIIVQGEGRNHGFGDVALVQTQAGKLLMIFVGGVGLWQSTPDRPQRTYISGSRDEGLTWSPPRDITHFI
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Known secondary structure (DSSP)



STTS

TTS
SS
TTT

SSS

SSTTSS




GGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FGKDCADPGRSRWLASFCASGQGLVLPSGRIMFVAAIRESGQEYVLNNYVLYSDDEGDTWQLSDCAYRRG
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Known secondary structure (DSSP) SSTT
SSTTGGG


S

TT



TT



SSTTSS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DEAKLSLMPDGRVLMSIRNQGRQESRQRFFALSSDDGLTWERAKQFEGIHDPGCNGAMLQVKRNGRDQVL
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Known secondary structure (DSSP)
S
TTS



SS
TTSB
SSTTSS

GGG

SB
SS


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence HSLPLGPDGRRDGAVYLFDHTSGRWSAPVVVNSGSSAYSDMTLLADGTIGYFVEEDDEISLVFIRFVLDD
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Known secondary structure (DSSP)

SSSSTTTT



TTS
TTTT
 ......
Sequence LFDARQ
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Known secondary structure (DSSP)

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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