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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8giuA_

Fold library idPDB HeaderMoleculeTitle
c8giuA_2.39PDB header: virusChain: A: PDB Molecule: capsid protein;


Added to library: Sat May 27 09:25:15 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TAPVRQEGIMTQGDLVTVTSDGIDLNALWNSFAESIAIYNEAMDNLIQLLTYPVTVPVEPVVQIGETTFE
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Known secondary structure (DSSP)

S



S
B
TTS




TT


GGG
GGGG














 .........80.........90.........100.........110.........120.........130.........140
Sequence EATELGVPRGAGLPIEVFQMGYDLRHYDKRNAYSWMFLADADGRQVEAIHDAVLWADKRLVFRKVMEALF
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Known secondary structure (DSSP)


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 .........150.........160.........170.........180.........190.........200.........210
Sequence DNRTRRANIRNQAYNVYPLYNGDGVPPPRFKNNVFDETHSHYVISHNSVVDSSDLEDLMELLAEHGYSPQ
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Known secondary structure (DSSP)

S
TT

SSBS
SS



BTTB


TT
BS
SSSS

TTT
STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AGTQFLLLANKAETDAIRQFRRGVVNNNGATAGYDFIPSPTQPAMMLPNAEGLLGNQPAPTFGGLAVIGS
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Known secondary structure (DSSP) TT
TT

TT
B
GGG
B
SS

TTS





STT

SS



STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YGFWNIVEEDYIPPGYLVGVGYGGAFNLGNPVGLRQHANPAMQGLRIIAGNYQRYPLVDGFYARSFGTGV
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Known secondary structure (DSSP) TT
TTS
TTTTTTB

S
SSGGG
S
SSS
 .........360.........370.........380.
Sequence RQRGGAAIMQIKASGAYECPPIYKKGGGFLV
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Known secondary structure (DSSP) SSTTS

SSSS



GGGSTTS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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