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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8gh9A_

Fold library idPDB HeaderMoleculeTitle
c8gh9A_3.80PDB header: transport proteinChain: A: PDB Molecule: calcium-activated potassium channel subunit alpha-1;


Added to library: Sat May 13 09:21:21 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QRMWWAFLASSMVTFWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNPIESCQNFYKD
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Known secondary structure (DSSP)


TTT


SSS

SSS


TTS



S

SS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence FTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALRLIQF
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Known secondary structure (DSSP) S
T
SSSSS


STT
S

T

 .........150.........160.........170.........180.........190.........200.........210
Sequence SEILQFLNILKTSNSIKLVNLLSIFISTWLTAAGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMST
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Known secondary structure (DSSP) TTS




TTTTTTT




TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVS
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Known secondary structure (DSSP)



SS


SGGGTS


S
S




TT



 .........290.........300.........310.........320.........330.........340.........350
Sequence NFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILAN
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Known secondary structure (DSSP) S
TTS



BSS


TTSTTTB


BS
SS
TGGG
S

 .........360.........370.........380.........390.........400.........410.........420
Sequence KYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQS
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Known secondary structure (DSSP) SS
S

TT

B

S
STTT
TT

TTTT

B

 .........430.........440.........450.........460.........470.........480.........490
Sequence CLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNEMYTEYLSSAFVGLSFPTVCELCFVKLKLLMIA
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Known secondary structure (DSSP) STTSSS







S
ST


SS





SS

TTTT


SS


 .........500.........510.........520.........530.........540.........550.........560
Sequence IEYEGTLGFFIASDAKEVKRAFFYCKVKKYDSTGMFHWCAPKEIEKVILTRSEAAMTVLSGHVVVCIFGD
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Known secondary structure (DSSP)






S
GGGS






B
SSSSSB





B

S


S




 .........570.........580.........590.........600.........610.........620.........630
Sequence VSSALIGLRNLVMPLRASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINL
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Known secondary structure (DSSP) SSS



TT
SSS
GGG


S
GGGTTTSSS

S
TT
TTTSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence CDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDTTGVNIPIITELVNDTNVQFLDQDDDDDPDTEL
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Known secondary structure (DSSP)
S

S
TTT


STTTT
B


BGGGS



S
SS
SGGG
SSS


TTS
G
 .........710.........720.........730.........740.........750.........760.........770
Sequence YLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENASTPQTLANRDRCRCY
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Known secondary structure (DSSP) GGSTTTGGG



SGGGGGSSSSSS






S










 .........780.........790.........800.........810.........820.........830
Sequence GDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCTKRYVITNPPYEFELVPTDLIFCLMQFD
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Known secondary structure (DSSP)





TTSS

S





S


SS



TT
B








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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