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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8gh6A_

Fold library idPDB HeaderMoleculeTitle
c8gh6A_3.08PDB header: rna binding protein/rna/dnaChain: A: PDB Molecule: reverse transcriptase-like protein;


Added to library: Sat Apr 8 13:44:40 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GWTCQFCERTFSTNRGLGVHKRRAHPVETNTDAAPMMVKRRWHGEEIDLLARTEARLLAERGQCSGGDLF
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Known secondary structure (DSSP)

TTT

SS
T



SS



TS


 .........80.........90.........100.........110.........120.........130.........140
Sequence GALPGFGRTLEAIKGQRRREPYRALVQAHLARFGSTSRQKRRAEYARVQELYKKCRSRAAAEVIDGACGG
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Known secondary structure (DSSP)
TTS


TST



S



 .........150.........160.........170.........180.........190.........200.........210
Sequence VGHSLEEMETYWRPILERVSDAPGPTPEALHALGRTQLWKPISVEEIKASRFDWRTSPGPDGIRSGQWRA
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Known secondary structure (DSSP)

S
S







T


TT



S



S



TT


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence VPVHLKAEMFNAWMARGEIPEILRQCRTVFVPKVERPGGPGEYRPISIASIPLRHFHSILARRLLACCPP
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Known secondary structure (DSSP) S
TS

TTTT
SSSS

SGGG




 .........290.........300.........310.........320.........330.........340.........350
Sequence DARQRGFICADGTLENSAVLDAVLGDSRKKLRECHVAVLDFAKAFDTVSHEALVELLRLRGMPEQFCGYI
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Known secondary structure (DSSP)
TTB
SSSSS
T


TSGGG
BTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence AHLYDTASTTLAVNNEMSSPVKVGRGVRQGDPLSPILFNVVMDLILASLPERVGYRLEMELVSALAYADD
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Known secondary structure (DSSP) T
TT
S


B


BT
TTTS
TT
STT
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence LVLLAGSKVGMQESISAVDCVGRQMGLRLNCRKSAVLSMIPDGHRKKHHYLTERTFNIGGKPLRQVSCVE
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Known secondary structure (DSSP) SST

TTT


BTTTTB

B

S


TT


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence RWRYLGVDFEASGCVTLEHSISSALNNISRAPLKPQQRLEILRAHLIPRFQHGFVLGNISDDRLRMLDVQ
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Known secondary structure (DSSP)
TTTT





SS

TTGGGSS


 .........570.........580.........590.........600.........610.........620.........630
Sequence IRKAVGQWLRLPADVPKAYYHAAVQDGGLAIPSVRATIPDLIVRRFGGLDSSPWSVARAAAKSDKIRKKL
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Known secondary structure (DSSP) TT

TTS
S
TTTTS




GGGGG
SSTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence RWAWKQLRRFSRVDSTTQRPSVRLFWREHLHASVDGRELRESTRTPTSTKWIRERCAQITGRDFVQFVHT
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Known secondary structure (DSSP) S

TTT

STTTGGGGGGTT
GGGGTSGGGS
 .........710.........720.........730.........740.........750.........760.........770
Sequence HINALPSRIRGSRGRRGGGESSLTCRAGCKVRETTAHILQQCHRTHGGRILRHNKIVSFVAKAMEENKWT
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Known secondary structure (DSSP) TT
S

TTTTTTT
TTS
GGGTB
TTS

SB

T
GGGTT

 .........780.........790.........800.........810.........820.........830.........840
Sequence VELEPRLRTSVGLRKPDIIASRDGVGVIVDVQVVSGQRSLDELHREKRNKYGNHGELVELVAGRLGLPKA
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Known secondary structure (DSSP)



TT

STT
SSS
TTST


G
 .........850.........860.........870.........880.........890........
Sequence ECVRATSCTISWRGVWSLTSYKELRSIIGLREPTLQIVPILALRGSHMNWTRFNQMTS
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Known secondary structure (DSSP) GGTTS
B
TS


TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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