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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c8g9fB_

Fold library idPDB HeaderMoleculeTitle
c8g9fB_3.20PDB header: replication, transferaseChain: B: PDB Molecule: dna polymerase alpha subunit b;


Added to library: Sat Apr 15 11:02:52 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QKYGSRTNRGEVVTTYGELQGTTWNGGSGSNTNVELFTSLDEPLTKMYKFMFQKLMDIREVVSIKIEELG
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Known secondary structure (DSSP)
TTTT
S
TT
S


SS



TTSS




SS



S



S


 .........80.........90.........100.........110.........120.........130.........140
Sequence ASLKDHFQIDEFTSVSLPAQETVTVLGQIGCDSNGKLNSKSVILEGDREHSAGMQVPVDLSELKDYSLFP
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Known secondary structure (DSSP) T





SSS
SSSS


TTS

TT
B
TTS
SS

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GQVVIMEGTNSTGRRFVPTKLYEGVPLPFHQPSKEFEECPQQMVITACGPFTTSDTITYDALKDLIDIVN
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Known secondary structure (DSSP) T
SSSS
B











GGGTT


S

S
TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence RDRPDICILLGPFLDAKHEQIENLQLTVTFEDVFKRCLKMIIEGTRPSGCHLVIVPSLRDVHHDPVYPQP
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Known secondary structure (DSSP)

SS
SSBSS
TT

SS
TTTTT


TTBTTS


BSB
 .........290.........300.........310.........320.........330.........340.........350
Sequence PFSCFEPAKEDKERVHFVADPCTLSVNGVVIGMTSTDLLFHMGAEEISSSDRFSRILRHILTQRSYYPLY
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Known secondary structure (DSSP)


S



TTTTTT

BSTT
SS
TT



TBS


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence PPNEEINIDYEALYSYTPMPVTPDVFIVPSELRYFIKDVTGCICINPGRLTKGLVGGTYARFLVKSGAMR
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Known secondary structure (DSSP) S

TT

B

B
SS

S


SS

TT


STT

TT


 .........430.
Sequence STCISAQVVRV
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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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