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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8g6rA_

Fold library idPDB HeaderMoleculeTitle
c8g6rA_3.40PDB header: replicationChain: A: PDB Molecule: nsp12;


Added to library: Sat Apr 1 12:24:29 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DMAYLNRVRGSSAARLEPCNGTDTQHVYRAFDIYNKDVACLGKFLKVNCVRLKNLDKHDAFYVVKRCTKS
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Known secondary structure (DSSP)
TT
SSTTS





SS

S
SSSSSS



GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence AMEHEQSIYSRLEKCGAVAEHDFFTWKDGRAIYGNVCRKDLTEYTMMDLCYALRNFDENNCDVLKSILIK
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Known secondary structure (DSSP) GTSTTB

TT
SSBSS

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VGACEESYFNNKVWFDPVENEDIHRVYALLGTIVSRAMLKCVKFCDAMVEQGIVGVVTLDNQDLNGDFYD
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Known secondary structure (DSSP) TSS
GGGGGSTTTT
TTT
TT
B

GGGBBTTS
B

 .........220.........230.........240.........250.........260.........270.........280
Sequence FGDFTCSIKGMGIPICTSYYSYMMPVMGMTNCLASECFVKSDIFGEDFKSYDLLEYDFTEHKTALFNKYF
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Known secondary structure (DSSP)
TT
B

STT



TTTTGGG
S

S
SSSSS

TGGGG




 .........290.........300.........310.........320.........330.........340.........350
Sequence KYWGLQYHPNCVDCSDEQCIVHCANFNTLFSTTIPITAFGPLCRKCWIDGVPLVTTAGYHFKQLGIVWNN
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Known secondary structure (DSSP) TT

S


SSGGG

STTS
TTT
TTTTT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DLNSINELLQFCSDPALLIASSPALVDQRTVCFSVAALGTGMTNQTVKPGHFNKEFYDFLLEQGFFSEGS
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Known secondary structure (DSSP) S


STS
B


SS
SS

TT










TTT
S
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence ELTLKHFFFAQKGDAAVKDFDYYRYNRPTVLDICQARVVYQIVQRYFDIYEGGCITAKEVVVTNLNKSAG
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Known secondary structure (DSSP) S




B




TTGGGGG






TTSSS





GGG




S
S


 .........500.........510.........520.........530.........540.........550.........560
Sequence YPLNKFGKAGLYYESLSYEEQDELYAYTKRNILPTMTQLNLKYAISGKERARTVGGVSLLSTMTTRQYHQ
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Known secondary structure (DSSP) TT

S
TTS




B





BSSS




B
 .........570.........580.........590.........600.........610.........620.........630
Sequence KHLKSIVNTRGASVVIGTTKFYGGWDNMLKNLIDGVENPCLMGWDYPKCDRALPNMIRMISAMILGSKHT
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Known secondary structure (DSSP)

SSSB
TT

STTTSS
SS


TTS
TTTT
T
 .........640.........650.........660.........670.........680.........690.........700
Sequence TCCSSTDRFFRLCNELAQVLTEVVYSNGGFYLKPGGTTSGDATTAYANSVFNIFQAVSANVNKLLSVDSN
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Known secondary structure (DSSP) TTS
TS


TT

SS

TTSTTTS
GG
 .........710.........720.........730.........740.........750.........760.........770
Sequence VCHNLEVKQLQRKLYECCYRSTTVDDQFVVEYYGYLRKHFSMMILSDDGVVCYNNDYASLGYVADLNAFK
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Known secondary structure (DSSP) G


TS
SS

TTTTSS

 .........780.........790.........800.........810.........820.........830.........840
Sequence AVLYYQNNVFMSASKCWIEPDINKGPHEFCSQHTMQIVDKDGTYYLPYPDPSRILSAGVFVDDVVKTDAV
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Known secondary structure (DSSP) TT
S


TTT
S
GGG

S
BTTBTT

SS


S
T
 .........850.........860.........870.........880.........890.........
Sequence VLLERYVSLAIDAYPLSKHENPEYKKVFYVLLDWVKHLYKTLTAKFWDESFYANMYEKS
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Known secondary structure (DSSP) GGGGG
SS


TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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