Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8fy9F_

Fold library idPDB HeaderMoleculeTitle
c8fy9F_3.10PDB header: dna binding protein/dnaChain: F: PDB Molecule: cas1;


Added to library: Sat May 6 09:05:11 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PIIAGKSESSELPRVEDRATFIYIEHAKINRVDSAVTVAEAKGVVRIPAAMIGVLLLGPGTDISHRAVEL
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

BTTB

STTS

GGGS
SS
TT
SS


GGG
TT



 .........80.........90.........100.........110.........120.........130.........140
Sequence LGDTGTALVWVGEQGVRYYASGRALARSTRFLVKQAELVTNERSRLRVARRMYQMRFPTEDVSKLTMQQL
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) T


SSS



S
S
S

S
TTS

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence RSHEGARVRRKYRELSKKYNVPWKKRVYNPDDFAGGDPINQALSAAHVALYGLVHSVVAALGLSPGLGFV
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) T



S



SSS


SST

TT

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HTGHDRSFIYDVADLYKAEITVPIAFAVAAEAEEGQDIGQLARLRTRDAFVDGKILKRMVKDLQTLLEIP
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)

SSTTTTT

TT

TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D