Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8ftuA_

Fold library idPDB HeaderMoleculeTitle
c8ftuA_5.73PDB header: transport proteinChain: A: PDB Molecule: protein transport protein sec39;


Added to library: Sat Mar 4 09:52:51 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNPQLYLCASVFITRGDVKSVSEIYQGLQSDAERLQYLKLLCVMWPELDAPTNISFVLKDIELNGMDESS
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)

TT
T

SS
TTS
GGGGGGGGS







 .........80.........90.........100.........110.........120.........130.........140
Sequence VLVSLIQEDSSLTAISEMDVNTISKRVNALASYVEETLIGFNIHIRETHMLEDFIRARTLVVNSLSKDAL
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)
GGGSS
TT



GGG

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence CSLELLANSTSKSLVSWLDGILKPLDHLNRRLDTKLSIFQFENLSAQDAVSEMWKLPVKEVSVVRSMMKY
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TTT


TT



TS


SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence EVEPYLKFQGSYTPFYEVIFNPDNFPLDSINNFQIYKYLSSQPTPLDTKFNETKWNILYSNGKNLASLPN
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) TT

TSSTTT



STT





GGGGG



 .........290.........300.........310.........320.........330.........340.........350
Sequence LVFELESLIKSFGDDSQIFSGISLNEWLVNLKFMNAMDIKDLKSLKKLQNEDSVVQTSYFSIITQNMFQG
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP) TT
S
GGGGTT

TTT

STTS
TSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence HIDIKTVQNVVEFITNELQTSILLESLLKLGKFDILEQFVSTSGVKIQDKVIIQHFWRFFNIASNGSLSD
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) S



TT






SSS
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PDMKNANRTLNLLSNKETHSNLYDILTIVDRLSHYSLSFKRGMPFKPAHISEFKANPMEIVEKLLDLNPK
Predicted secondary structure




















SS confidence





































































Known secondary structure (DSSP) T
S
SGGGTS

TT

GGGGGGGGG
T
GG
 .........500.........510.........520.........530.........540.........550.........560
Sequence LRKNIEVTFDILKELYTALQVTPSDKDFTKEYSKLLSEHINNLLANGDFKFAFDQAINLIERPDAAEHWV
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) GTT
T


SSTT
TT
TSTTGGGG
 .........570.........580.........590.........600.........610.........620.......
Sequence TIFQVGKYIDPNWLDAEIPTEIIYLQLGIVSKLLHICPEKEYEVITSQWSGLELELSTRNLISDKYS
Predicted secondary structure

















SS confidence


































































Known secondary structure (DSSP) T


TTSGGG


TTTS
GGGS
TTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D