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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8fojA_

Fold library idPDB HeaderMoleculeTitle
c8fojA_4.80PDB header: dna binding proteinChain: A: PDB Molecule: dna primase;


Added to library: Sat Jun 3 16:44:17 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YKSLYPFKHIFNWLNHSPKPSRDMINREFARYNSFNSVQDFKAQIEKANPDRFEIGAIYNKPPLKALEKE
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Known secondary structure (DSSP)

SSS
SSSS

T


B

SS

S

SS





 .........80.........90.........100.........110.........120.........130.........140
Sequence LVFDIDMDDYDAFRTCCSGAQVCSKCWKFISLAMKITNTALREDFGYKDFIWVFSGRRGAHCWVSDKRAR
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Known secondary structure (DSSP)
GGGGGGG
SS

TT


TT




SSS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ALTDVQRRNVLDYVNVIRDRNTDKRLALKRPYHPHLARSLEQLKPFFVSIMLEEQNPWEDDQHAIQTLLP
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Known secondary structure (DSSP) T








TTS




SS

TTTT
TTSSTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ALYDKQLIDSLKKYSKEKWNDIDQIATSLFKGPKQDSHIIKLRECKEDLVLMTLYPKLDVEVTKQTIHLL
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Known secondary structure (DSSP) T
S




STTS

B
S
TT

 .........290.........300.........310.........320.........330......
Sequence KAPFCIHPATGNVCVPIDESFAPEKAPKLVSLTALQPFINQFQAYVSSLLKNELGS
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Known secondary structure (DSSP)
TT
B
TTT
BB


TT

GGGS
B

TTSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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