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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8focB_

Fold library idPDB HeaderMoleculeTitle
c8focB_3.70PDB header: dna binding proteinChain: B: PDB Molecule: dna primase large subunit;


Added to library: Sat Jun 3 16:50:18 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSSEEEKKLYARLYESKLSFYDLPPQGEITLEQFEIWAIDRLKILLEIESCLSRNKSIKEIETIIKPQFQ
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Known secondary structure (DSSP)

TSSS




S


S


TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence KLLPFNTESLEDRKKDYYSHFILRLCFCRSKELREKFVRAETFLFKIRFNMLTSTDQTKFVQSLQFISNE
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Known secondary structure (DSSP) TS

S


TSSS




 .........150.........160.........170.........180.........190.........200.........210
Sequence EKAELSHQLYQTVSASLQFQLNLNEEHQRKQYFQQEKFIKLPFENVIELVGNRLVFLKDGYAYLQQLNLL
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Known secondary structure (DSSP) T


S


GGGGTT
STT

 .........220.........230.........240.........250.........260.........270.........280
Sequence SNEFASKLNQELIKTYQYLPRLNEDDRLLPILNHLSSGYTDEINAQSVWSEEISSNYPLCIKNLMEGLKK
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Known secondary structure (DSSP) TT
TTTT


S
TTGGGSTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence NHHLRYYGRQQLSLFLKGIGLSADEALKFWSEAFTRNGNMTMEKFNKEYRYSFRHNYGLEGNRINYKPWD
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Known secondary structure (DSSP) S


TT

TTSSS
TTT
STT







 .........360.........370.........380.........390.........400.........410.........420
Sequence CHTILSKPRPGRGDYHGCPFRDWSHERLSAELRSMKLTQAQIISVLDSCQKGEYTIACTKVFEMTHNHIA
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Known secondary structure (DSSP) TS



TT


S
S
TT

TT




 .........430.........440.........450
Sequence HPNLYFERSRQLQKKQQKLEKEKLFNNGNH
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Known secondary structure (DSSP)
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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