PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c8fedI_

Fold library id	PDB Header	Molecule	Title
c8fedI_	2.76	PDB header: membrane protein	Chain: I: PDB Molecule: conserved hypothetical integral membrane protein yrbe1a;

Links to external resources
Added to library: Sat Feb 25 08:51:44 2023

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L E K P L A T V G G F F K M S V M T G K A L F T R P F Q W K E F V L Q S W F L I R V A F L P T L A V S I P L T V L I I F T L N I L L A E F G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A A D V S G A G A A L G A V T Q L G P L V T V L V V A G A G S T A I C A D L G A R T V R E E I D A L E V L G I D P I E R L V V P R V V A S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F V A F M L N G A V I T I G L V G G F F F G V Y I Q N V S A G A Y V S T L T L L T G F P E V L I S V V K A T L F G M I A G L V G C Y R G L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 .

Sequence V A G G S K G V G T A V N E T L V L C V V A L F A V N V V L T T I G V R F G T G R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	E	K	P	L	A	T	V	G	G	F	F	K	M	S	V	M	T	G	K	A	L	F	T	R	P	F	Q	W	K	E	F	V	L	Q	S	W	F	L	I	R	V	A	F	L	P	T	L	A	V	S	I	P	L	T	V	L	I	I	F	T	L	N	I	L	L	A	E	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									S																		S	S																										T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	A	D	V	S	G	A	G	A	A	L	G	A	V	T	Q	L	G	P	L	V	T	V	L	V	V	A	G	A	G	S	T	A	I	C	A	D	L	G	A	R	T	V	R	E	E	I	D	A	L	E	V	L	G	I	D	P	I	E	R	L	V	V	P	R	V	V	A	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T												T																												T	T								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	V	A	F	M	L	N	G	A	V	I	T	I	G	L	V	G	G	F	F	F	G	V	Y	I	Q	N	V	S	A	G	A	Y	V	S	T	L	T	L	L	T	G	F	P	E	V	L	I	S	V	V	K	A	T	L	F	G	M	I	A	G	L	V	G	C	Y	R	G	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																									T	T										S																																		T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Sequence	V	A	G	G	S	K	G	V	G	T	A	V	N	E	T	L	V	L	C	V	V	A	L	F	A	V	N	V	V	L	T	T	I	G	V	R	F	G	T	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T																															T		S