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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8fdwC_

Fold library idPDB HeaderMoleculeTitle
c8fdwC_2.90PDB header: viral proteinChain: C: PDB Molecule: spike protein s2;


Added to library: Sat May 13 09:06:54 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLN
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Known secondary structure (DSSP)

S


SS
SGGG










TTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence RALTGIAVEQDKNTQEVFAQGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGT
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Known secondary structure (DSSP) S

















TT
GGGGTTT
TT

S


 .........150.........160.........170.........180.........190.........200.........210
Sequence ITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDV
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Known secondary structure (DSSP) SSS
GGGGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence VNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRAS
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Known secondary structure (DSSP)
 .........290.........300.........310.........320.........330.........340.........350
Sequence ANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPR
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Known secondary structure (DSSP) TTTTS


SBSTTSSS



TTS
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTS
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Known secondary structure (DSSP) SSTTTT


GGG
S






















TTT





 .........430.........440.........450.........460.........470.........480.........490
Sequence PDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAGLIAIVMVT
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Known secondary structure (DSSP)






GGG







GGGGS










S



TTTTT
 .........500........
Sequence IMLCCMTSCCSCLKGCCS
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Known secondary structure (DSSP) TSST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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