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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8f5pE_

Fold library idPDB HeaderMoleculeTitle
c8f5pE_3.40PDB header: protein transportChain: E: PDB Molecule: wd_repeats_region domain-containing protein;


Added to library: Sat Dec 24 10:18:18 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSLFVVNAPGHEGQLKEQLIVAHKRRPLLATAWVNPPSVLITNSEGEVLTQVADPPGSTGRTHQPTALTW
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Known secondary structure (DSSP)




SS
SSSSTTTTTS

S
TT

S





 .........80.........90.........100.........110.........120.........130.........140
Sequence HPNEELLVIGWSNGEMSLWSMPSVSSLALGEDYTTAAARSAVQLIAAKAATQSSAEGATREHASGAVVAS
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Known secondary structure (DSSP)
SSSS
SSS



SGGG


S


ST

TTTTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence EWSTRGLYLVSASQQRHVVMWMLEKIPAETSVTFKLKPLWSVQSREPVARIIHVPSKASDDISFLLADGG
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Known secondary structure (DSSP)
SSS
TTS
SSS



SS

S

SS





SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TSVTAINEDQQLFPCVTQQEQIASVLYDAATRTLVTLTTTSMIEVYAVGEDIKGTSTLRRKLSRIAMSMV
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Known secondary structure (DSSP) S
TT



BS


SS
TTTTTTS

TTS








 .........290.........300.........310.........320.........330.........340.........350
Sequence WASPGVVAFGSGDDRLRILDLSSGSLDVLLLPQPDLHVSSLATFAAKGTMIVGTVEGFLVVFQHHEASQW
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Known secondary structure (DSSP) TT
SSS
TTT



SSTT



TTTTSSS

GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence EAMTVHQVGKCVDRVVLTALGDVALCCGGSELQVLHEIIRKRAWDGVAAATQISSDMVVIESITGCQCLL
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Known secondary structure (DSSP)

S

TTS
TTT


SS
SSSTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence QNKGNVHGVSIAFPNIALWNGSQIDFYMIDEATSEITFINFVLTTSPAFAIHREGLIYVKGNRIVFETMQ
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Known secondary structure (DSSP)
SS


TT
SS


BTTTTB





S

SS
TT
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LAPIAQMTFTESEGVPVIMDIMNDYLVVVSSKNYLRLARISTRDLQQLGPARPLTFPLEVSVSGARVNAQ
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Known secondary structure (DSSP)



GGG

TTTTS
SS

S








TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence GRRVALMSTLGPLALPDTRIWVYDSDTDKMSFFDFGSRNEIPNSVYWNTPEPNTTTVGEFEYILLACETY
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Known secondary structure (DSSP) S
TTTTTTTTSGGGT
B


TT




S
 .........640.........650.........660.........670.........680.........690.........700
Sequence QENYAEKKAELEDARRESRPHNIVTFFATHDGLVLQNFAPLRRYQICLVGLTIPDFLLASVKINGDPNNA
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Known secondary structure (DSSP)


SSSGGGS



TT

TTTT

TT

TT
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence EDYVIEQKRLRDFEGLKSDKDVAVREALMKFSYYATIGNMDEAYRCVKSIKNPAAWQGLARLCVTSGRLD
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Known secondary structure (DSSP) S




TT
TT

S


STT
T


T

 .........780.........790.........800.........810.........820.........830.........840
Sequence VAAVCLATMEDCVAARALREAKEDYPDDQDVQLATLALGLSMTEEAVELLRKSKRYDLLTDVYMACGKFE
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Known secondary structure (DSSP) TT

TT
TT
T

TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence HAQRHSERFDRARIRPVAYKYAQFMESLQNMDAAIMWYYNAKCASTDVPRIFFQTNRMHELRQLMMITFA
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Known secondary structure (DSSP) T
TTST
TT
TTTTTT



 .........920.........930.........940.........950.........960.........970.........980
Sequence TIFPQNRELLLWWAQHSERRHNVQEALRFYNAGEDVYNIVRILCSLTPPKLDSALQLVNKEMDKAKMRFQ
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Known secondary structure (DSSP) GGG
TT
T
SSS

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QQQAFAEPDPVGSAYFVAQLYERQGDDQLALQYYQAAGAYRSGVRVAWKMEQYGVVANLAMKSSDERLML
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Known secondary structure (DSSP)





TTTTT
T
TSSS

TTTTTTT
 .......
Sequence ETAMALE
Predicted secondary structure

SS confidence






Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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