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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8f5oD_

Fold library idPDB HeaderMoleculeTitle
c8f5oD_3.50PDB header: protein transportChain: D: PDB Molecule: tpr_region domain-containing protein;


Added to library: Sat Dec 24 11:41:41 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALGYVAFLERKTQLAKAQSLLDRLFVLYPNCSIPPLVGKARLLMQAEDWEQAIEVTHRILAHDKSNVEAL
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Known secondary structure (DSSP)
T
TT
TTT
TT

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALEALYAMAKDTRHDAAPVRVRRLLDAVRAKEPRNVALLHQFALVFSRLAGDRLDLLSLTTQFSDMAYAL
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Known secondary structure (DSSP) T
S
GGG
SS
S
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DSRNGDVLCGLGYQQLYRHDDKAATETFRKAATLTDSLDPLLGTVTCLLRQGDMEAAATQLQLCNQLQPA
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Known secondary structure (DSSP)
SSST
S

T
T

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence AQRNAELSMLNAQLRWHRRGMEEETAVLRYLDQAAEAIKQDVKERAGVGMEVYVHLNAPVALAIAHAYIM
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Known secondary structure (DSSP) SS

TTTTTTTT
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence HCRNEPPDPVVGEKCGRHLEFIVQHLPACMEAQLMLAKVWFVTGEVRKAQNLLKSTLIVQEQPLPDAFLL
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Known secondary structure (DSSP) S

S




STT




SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence SSQICQYMGDTKLACQALAQARTLDFSLQEKPLYNLLLGTVKSAATAPSAVPETVTLYLQLAQAQLRVRD
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Known secondary structure (DSSP) T

TT
SGGGGST

TTT






 .........430.........440.........450.........460.........470.........480.........490
Sequence VDAARETLTEAALKFRGSAQIGRVIIAQAMLAARTDVDKSIELLRQVSSKSEFYIAAHSQLGKLFLTHKH
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Known secondary structure (DSSP) STTTSTTTTT
TS
TT
GGGGTTTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence NVAMYIQCFQEMAESVPSAQSYVELGEAYTTIQEPEQAIAAYEKAKALSPSSSELSVRVGRALVAAHDYA
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Known secondary structure (DSSP)
SS

TT

GGGTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence KAIRYYQDALVTDPHLSIVRADLATLQWRLGHIEEARETIVASPVYEEAVGTAIERINLYLLLYKVLRDQ
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Known secondary structure (DSSP)
TT

TT

T
SS



STTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence PWTVPLSEEGTAAADSDDNHGDAALTALLTARSLQRRLLEHQLRTTEAPEVITEQRVVMSRICTEAGARC
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Known secondary structure (DSSP)
B




TTSS

TTS

TTT


TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence IYSTPAPPPFSVVMTDKKVEAAAALAVQSAIASRLTNAREYLREAIAFDESNERAQLESAQLCYRTGDTE
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Known secondary structure (DSSP) T

B



STTTTT
SSGGG
SS
T
 .........780.........790.........800.........810.........820.........830.........840
Sequence GCEQHCTTVLRMAEGSANTADAAILLANLYTEQNRDEDARNMFEDLLRKTPQHYEALVYYLILLYHAGQL
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Known secondary structure (DSSP)

S
TTTTSSS


S

T
G
 .........850.........860.........870.........880.........890.........900.........910
Sequence PEAKEALERAAAAVPIGQRADPGLSYVRGLYEHLCNNNAEALRHFNLARLPAGNPWCTRALVRMIRIYLV
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Known secondary structure (DSSP) GGGS
TTS


TT

STTS
 .........920.........930.........940.........950.........960.........970.........980
Sequence PTTQDLWVRGTTTGSTELHDNIRHAEQLLLLLPVHSEERRILQAYCTMATRRPEELETALHLFLECIVAA
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Known secondary structure (DSSP)
SS

TTS




TTS
TTST
TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence ETSTATLAFALQCKVIHPEAFLGLAICLFISGQETAARNVLARLLESKDITTKMSAMKQAEDKVLSPPIA
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Known secondary structure (DSSP) T

SS



TT

TT
STT





TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence ILTCSEDDTIERAMLFEAYMDTQEGRLKDARFVLQQVLSANEGCSSAWNELGLIYERNQKHKNASQCYQK
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Known secondary structure (DSSP) TT

SS

T

S

TT
 .........1130.........1140.........1150.........1160.........1170.........1180
Sequence AWKLVQEADPDVGYKLGFNYLRGGQPVKAIDVCKRVLTHHATYPRIEADIMDAAYSMLRP
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Known secondary structure (DSSP) TT

ST
TSTT
TT
TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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