PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c8f2uN_

Fold library id	PDB Header	Molecule	Title
c8f2uN_	3.53	PDB header: endocytosis	Chain: N: PDB Molecule: coiled-coil domain-containing protein 93;

Links to external resources
Added to library: Sat May 27 10:09:15 2023

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q N V K L T E I L E L L V A A G Y F R A R I K G L S P F D K V V G G M T W C I T T C N F D V D V D L L F Q E N S T I G Q K I A L S E K I V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
G G G G
S S S
T T
S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V L P R M K C P H Q L E P H Q I Q G M D F I H I F P V V Q W L V K R A I E T K E E M G D Y I R S Y S V S Q F Q K T Y S L P E D D D F I K R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T G G G T
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E K A I K T V V D L S E V Y K P R R K Y K R H Q G A E E L L D E E S R I H A T L L E Y G R R Y R L T A S S V G Q I V G L C S A E I K Q I V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S S T T T
T

. . . . . . . . . 220 . . . . .

Sequence E Y A E K Q S E L S A E E S P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	N	V	K	L	T	E	I	L	E	L	L	V	A	A	G	Y	F	R	A	R	I	K	G	L	S	P	F	D	K	V	V	G	G	M	T	W	C	I	T	T	C	N	F	D	V	D	V	D	L	L	F	Q	E	N	S	T	I	G	Q	K	I	A	L	S	E	K	I	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T		G	G	G	G		S	S	S																	T	T		S			S						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	L	P	R	M	K	C	P	H	Q	L	E	P	H	Q	I	Q	G	M	D	F	I	H	I	F	P	V	V	Q	W	L	V	K	R	A	I	E	T	K	E	E	M	G	D	Y	I	R	S	Y	S	V	S	Q	F	Q	K	T	Y	S	L	P	E	D	D	D	F	I	K	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	G	G	G	T		S	S									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	K	A	I	K	T	V	V	D	L	S	E	V	Y	K	P	R	R	K	Y	K	R	H	Q	G	A	E	E	L	L	D	E	E	S	R	I	H	A	T	L	L	E	Y	G	R	R	Y	R	L	T	A	S	S	V	G	Q	I	V	G	L	C	S	A	E	I	K	Q	I	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T										T	T							S	S									T	T	T													T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	E	Y	A	E	K	Q	S	E	L	S	A	E	E	S	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T		S