Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8f2eA_

Fold library idPDB HeaderMoleculeTitle
c8f2eA_2.43PDB header: viral proteinChain: A: PDB Molecule: papain-like protease nsp3;


Added to library: Sat Mar 11 09:55:03 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEES
Predicted secondary structure

































SS confidence





































































Known secondary structure (DSSP)



S

TTTTGGGGSSGGGGSSS
SSS

SSS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAK
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) TS
TTTTTTS

TTT

GGGTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACI
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) T

TTTTS
TTS
T
SS
B

TTS
GGG

 .........220.........230.........240.........250.........260.........270.........280
Sequence DCSARHINAQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKG
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TT

TT

TS
TT

S


B



S




S
 .
Sequence G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D