PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c8etgF_

Fold library id	PDB Header	Molecule	Title
c8etgF_	3.40	PDB header: ribosome	Chain: F: PDB Molecule: 60s ribosomal protein l7-b;

Links to external resources
Added to library: Sat Dec 3 11:17:58 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A A E K K S A R Q K K R E L I A K R A E A Y E A E Y R A A E R E Q I E L A R K A R A E G N Y F V P H E P K L I F V V R I R G I N N I P P K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R K I M Q L L R L L Q I N N G I F V K F N K A I K E M L Q V V E P Y V T Y G I P N H K T V R E L I Y K R G F G K V N K Q R I P L S D N A I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T
S T T G G G
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E A A L G K Y S I L S V E D L I H E I Y T V G P N F K Q A A N F L W P F K L S S P L G G W R E R K F K H F I E G G D A G K R D E H I N G L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
S T T
T T B
T T
S S T T S B G G G T S S B
G G G T

. . . .

Sequence Q K M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	A	E	K	K	S	A	R	Q	K	K	R	E	L	I	A	K	R	A	E	A	Y	E	A	E	Y	R	A	A	E	R	E	Q	I	E	L	A	R	K	A	R	A	E	G	N	Y	F	V	P	H	E	P	K	L	I	F	V	V	R	I	R	G	I	N	N	I	P	P	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																												T																	S		S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	K	I	M	Q	L	L	R	L	L	Q	I	N	N	G	I	F	V	K	F	N	K	A	I	K	E	M	L	Q	V	V	E	P	Y	V	T	Y	G	I	P	N	H	K	T	V	R	E	L	I	Y	K	R	G	F	G	K	V	N	K	Q	R	I	P	L	S	D	N	A	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T			S	T	T								S					T					T	G	G	G																								T	T							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	A	A	L	G	K	Y	S	I	L	S	V	E	D	L	I	H	E	I	Y	T	V	G	P	N	F	K	Q	A	A	N	F	L	W	P	F	K	L	S	S	P	L	G	G	W	R	E	R	K	F	K	H	F	I	E	G	G	D	A	G	K	R	D	E	H	I	N	G	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T			S										T	T		T	T								B									T	T				S	S	T	T	S	B	G	G	G	T	S	S	B				G	G	G					T
	.	.	.	.
Sequence	Q	K	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T