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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8eplA_

Fold library idPDB HeaderMoleculeTitle
c8eplA_3.10PDB header: transport proteinChain: A: PDB Molecule: voltage-dependent r-type calcium channel subunit alpha-1e;


Added to library: Sat Dec 17 09:27:49 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPMSRRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGS
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Known secondary structure (DSSP)



TTT


BTTTB

TTTTT
SS
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YLRNGWNVMDFIVVLSGILATAGTLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFA
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Known secondary structure (DSSP) STTST

TTTTTTGGGGGG
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ILMFAIIGLEFYSGKLHRACFMNNSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVLT
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Known secondary structure (DSSP) STT
SS


SSSS



SS

B

SS

SSS




TTSS
SS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLR
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Known secondary structure (DSSP) TTSS
SSSTTTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RQQQIERELNGYRAWIDKAEEVMLAEEIRHMVKSQVFYWIVLSLVALNTACVAIVHHNQPQWLTHLLYYA
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Known secondary structure (DSSP)



GGGSTT

TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence EFLFLGLFLLEMSLKSSFNCFDFGVTVGSIFEVVWAIFRPGTSFGISVLRALRLLRIFKITKYWASLRNL
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Known secondary structure (DSSP) T


STT




GGGGGGGGGGGGGGSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VVSLMSSMKSIISLLFLLFLFIVVFALLGMQLFGGRFNFNDGTPSANFDTFPAAIMTVFQILTGEDWNEV
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Known secondary structure (DSSP) T
TT


BTTB

SS
SSSTSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence MYNGIRSQGGVSSGMWSAIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEEAFNQKHALQHH
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Known secondary structure (DSSP) TTT
GGGTT


 .........570.........580.........590.........600.........610.........620.........630
Sequence MSVWEQRTSQLRKHMQMIRRACHYIVNLRYFEMCILLVIAASSIALAAEDPVLTNSERNKVLRYFDYVFT
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Known secondary structure (DSSP)

TT


TTS
TTSS

SS
SSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence GVFTFEMVIKMIDQGLILLWNILDFVVVVGALVAFALANALRDIKTIKSLRVLRVLRPLKTIKRLPKLKA
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Known secondary structure (DSSP) TS


TTTT


TGGGGGSGGGS
 .........710.........720.........730.........740.........750.........760.........770
Sequence VFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKECIGNYVDHEKNKMEVKGRE
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Known secondary structure (DSSP) SS

SSTT

STTT

S
GGG



 .........780.........790.........800.........810.........820.........830.........840
Sequence WKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRMEMSIFYVVYFVVFPFFFVNI
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Known secondary structure (DSSP)
SS

SSTSST

STT



TTS
GGGTTTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence FVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRVWHFVVSPSFEYTIMAM
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Known secondary structure (DSSP) T


SS


S
SSSS
SS








SS
STTTTTSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence IALNTVVLMMKYYSAPCTYELALKYLNIAFTMVFSLECVLKVIAFGFLNYFRDTWNIFDFITVIGSITEI
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Known secondary structure (DSSP) TT

TT

T
TTS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence ILTDSKLVNTSGFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ
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Known secondary structure (DSSP) TT
SSS

SSS

GGGTTTTT
TT
TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence VFGNIKLDEESHINRHNNFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDTTAPSGQNENERCGTD
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Known secondary structure (DSSP) TTB


TTSSSSSSS
SSSTTSSTSSS

B


SSS

S
S

S



S
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence LAYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGRIHYTEMYEM
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Known secondary structure (DSSP) TGGGS

TTS
SSTT
SS
TT


SSSSTT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence LTLMSPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTALDIKIAKGGADRQQLDSELQK
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Known secondary structure (DSSP) S
TTSS
S
STTTTSSSS
GGGSTTS

SS


STTT
S

 .........1270....
Sequence ETLAIWPHLSQKML
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Known secondary structure (DSSP) TTTS


TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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