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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8eojB_

Fold library idPDB HeaderMoleculeTitle
c8eojB_3.07PDB header: transport proteinChain: B: PDB Molecule: microsomal triglyceride transfer protein large subunit;


Added to library: Sat May 6 08:51:13 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DRLYKLTYSTEVLLDRGKGKLQDSVGYRISSNVDVALLDDDQLIQITMKDVNVENVNQQRGEKSIFKGKS
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Known secondary structure (DSSP)



SSSS

SS




S
TTS
S
SSSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence PSKIMGKENLEALQRPTLLHLIHGKVKEFYSYQNEAVAIENIKRGLASLFQTQSGTTNEVDISGNCKVTY
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Known secondary structure (DSSP)
S
TT


S
GGGS




SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QAHQDKVIKIKALDSCKIARSGFLGVSSKATSVTTYKIEDSFVIAVLAEETHNFIKGKIVSKQKLELKTT
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Known secondary structure (DSSP)
SSS
SS







B



SSSS






 .........220.........230.........240.........250.........260.........270.........280
Sequence EMSGKQAAAIIKAVDSKYTAIPIVGQVFQSHCKGCPSLSELWRSTRKYLQPDNLSKAEAVRNFLAFIQHL
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Known secondary structure (DSSP)



S
S
TT

SS





SSSS


TTTTTS
GGGTTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RTAKKEEILQILKMENKEVLPQLVDAVTSAQTSDSLEAILDFLDFKSDSSIILQERFLYACGFASHPNEE
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Known secondary structure (DSSP) T

TTS

SSSTT

S
TT
SS
T
SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence LLRALISKFKGSIGSSDIRETVMIITGTLVRKLCQNEGCKLKAVVEAKKLILGGLEKAEKKEDTRMYLLA
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Known secondary structure (DSSP) S

S
TTT
TTSS

S
 .........430.........440.........450.........460.........470.........480.........490
Sequence LKNALLPEGIPSLLKYAEAGEGPISHLATTALQRYDLPFITDEVKKTLNRIYHQNRKVHEKTVRTAAAAI
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Known secondary structure (DSSP)

GGGTSS
S
STT

S
SSS


 .........500.........510.........520.........530.........540.........550.........560
Sequence ILNNNPSYMDVKNILLSIGELPQEMNKYMLAIVQDILRFEMPASKIVRRVLKEMVAHNYDRFSRSGSSSA
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Known secondary structure (DSSP) S


TTTS
TT
TTTSTTTS








 .........570.........580.........590.........600.........610.........620.........630
Sequence YTGYIERSPRSASTYSLDILYSGSGILRRSNLNIFQYIGKAGLHGSQVVIEAQGYAGMSAILFDVQLRPV
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Known secondary structure (DSSP)
SS
TTS
TT


SS
B


 .........640.........650.........660.........670.........680.........690.........700
Sequence TFFNGSVVKGLILLIDHSQELQLQSGLKANIEVQGGLAIDISGAMKTRVKNRVTVVITTDITVDSSFVKA
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Known secondary structure (DSSP)






TTS







SSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence GLETSTETEAGLEFISTVQFSQYPFLVCMQMDKDEAPFRQFEKKYERLSRGYVSQKRKESVLAGCEFPLH
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Known secondary structure (DSSP)

SSSS







S






 .........780.
Sequence QENSEMCKVVF
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Known secondary structure (DSSP) TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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