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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8eoiK_

Fold library idPDB HeaderMoleculeTitle
c8eoiK_3.40PDB header: membrane proteinChain: K: PDB Molecule: voltage-dependent l-type calcium channel subunit alpha-1c;


Added to library: Sat May 27 09:20:04 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LKNPIRRACISIVEWKPFEIIILLTIFANCVALAIYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKV
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Known secondary structure (DSSP)


SSTT






SS



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAIKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLH
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Known secondary structure (DSSP) STTTTTS


GGGGGGGGGGGGGGT
TTTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence IALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGIADVPAEDDPSPCALETGHGRQCQNGTVCKPGWDGPK
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Known secondary structure (DSSP)
TTTTSB

BSSSS
BSSSS
S





SS
SS



SSS



B


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HGITNFDNFAFAMLTVFQCITMEGWTDVLYWVNDAVGRDWPWIYFVTLIIIGSFFVLNLVLGVLSGEFSK
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Known secondary structure (DSSP) SS
S
SSSTTSS
SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence EREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLN
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Known secondary structure (DSSP) TTTTTTTTT


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence TLTIASEHYNQPNWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFVVCGGILETILVE
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Known secondary structure (DSSP) T


S


STTTTTS
T
SSST
 .........430.........440.........450.........460.........470.........480.........490
Sequence TKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKF
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Known secondary structure (DSSP) S

SS

TTSSTTTSS
T
 .........500.........510.........520.........530.........540.........550.........560
Sequence NFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNV
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Known secondary structure (DSSP) TTT

S

S

SSSTSSS

SSSGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence FLAIAVDNLADAELRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKG
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Known secondary structure (DSSP)



S



T
SS
SSS

 .........640.........650.........660.........670.........680.........690.........700
Sequence KLDNVLAAMMALFTVSTFEGWPELLYRSIDIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGE
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Known secondary structure (DSSP)



TTTTT
SSSST


STTTTTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence QEYKNCELDKNQRQCVEYALKARPLRRYIPKNQHQYKVWYVVNSTYFEYLMFVLILLNTICLAMQHYGQS
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Known secondary structure (DSSP) TT



SS
SSSS








S

TTTTT

SS

 .........780.........790.........800.........810.........820.........830.........840
Sequence CLFKIAMNILNMLFTGLFTVEMILKLIAFKPKHYFCDAWNTFDALIVVGSIVDIAITRISITFFRLFRVM
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Known secondary structure (DSSP) TTT
TTSTT

TTTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence RLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQVFGKIALNDTTEINRNNNFQTFPQ
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Known secondary structure (DSSP)
GGGTTTS
S



TTSS
SSTT

SS
 .........920.........930.........940.........950.........960.........970.........980
Sequence AVLLLFRCATGEAWQDIMLACMPGKKCAPESEPSNSTEGETPCGSSFAVFYFISFYMLCAFLIINLFVAV
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Known secondary structure (DSSP) TTSST

TTS


TTSTT
S
SSS

S


TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLV
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Known secondary structure (DSSP) TTTTTSSSTTSS

TT

SSB
TTTTT


TTTSS
SSTT
SS
 .........1060.........1070.........1080.........1090.........1100.........1110......
Sequence SMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRAIIKKIWKRTSMKLLDQVVPPAGD
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Known secondary structure (DSSP) TTT


SSSS
B
S


STT
TTTTTSS

SS
TTSTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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