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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8ej5A_

Fold library idPDB HeaderMoleculeTitle
c8ej5A_4.90PDB header: virusChain: A: PDB Molecule: gp10, tail tip lysin (spike);


Added to library: Sat Dec 17 08:55:50 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNDKEKIDKFIHSNLNDDFGLSVDDLVGKVKGIGRFSAWCGNSSTKIKQVLNAVKSIGVSPALFAAYEKN
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Known secondary structure (DSSP)

TSBTT

TT

TTTSTTTT
T

 .........80.........90.........100.........110.........120.........130.........140
Sequence EGYNGSWGWLNHTSPQGNYLTDAQFVARKLVSQSRQAGTPSWIDAGNPVDFVPASVKRKGNYDFSHNMKN
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Known secondary structure (DSSP)


TTS
SSTTS


SSS





S
SSS



S
TS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GKVGRAYIPLTAAATWAAYYPEGLQASYNRVQNYGNPFLDAANTILGWGGKIDGGGLDVVARAFEEFLKK
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Known secondary structure (DSSP) TBTTT

GGGGSSS




T






 .........220.........230.........240.........250.........260.........270.........280
Sequence LQDSMQWDLHSIGTDKFFSNQMFTITKTYNNTYRLNMNQKLLDEMKDLISRIDGGSGNDTGADDSDGDHG
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Known secondary structure (DSSP) S



BTTTTB


SSTT

SSS








SS

TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GKAGKSVAPNGKSGRKIGGNWTYSNLPQKYKDAIEVPKFDPKYLAGSPFVNTGDTGQCTELTWAYMHQIW
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Known secondary structure (DSSP) SSS

B



S




TTTS
T

S



GGGTTT
TT
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence GKRQPAWDNQVTNGQRVWVVYRNQGARVTHRPTVGYGFSSKPNYLQAMLPGVGHTGVVVAVFKDGSFLTA
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Known secondary structure (DSSP) SS




SSS


TTTTS


BSS
BTT

TTSTT

STTT

TTS
 .........430.........440.........450.......
Sequence NYNVPPYWAPSRVVEYALIDGVPENAGDNIMFFSGIK
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Known secondary structure (DSSP) SS
SSS
TT







TT
GGG




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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