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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8ef9A_

Fold library idPDB HeaderMoleculeTitle
c8ef9A_2.40PDB header: dna binding protein/dnaChain: A: PDB Molecule: dna polymerase theta;


Added to library: Sat Dec 17 09:04:02 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TFSIIDVASDRRLFNTFIKEWKTKERYSLALACEKREHDSDGLVLIGLSVCWGARDSYYISLQQVSERLG
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Known secondary structure (DSSP)


TT

S

S



BTTTTTT



 .........80.........90.........100.........110.........120.........130.........140
Sequence QVRSCLSRPGGVVVTYDIIQVYKTLVLSCGISLAGNCEDPKVACWLLDPGSEERTLPNMVTVYCPEELPL
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Known secondary structure (DSSP) B




SS



BS


TTS




GGGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LDGLGSAHAHCPRVRAATKSVLVHAVMNHLTGLLEKDSMLDLFRSIEMPSQVCLALLELNGVGFSVEECE
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Known secondary structure (DSSP) GTTS

SS


TT
T


 .........220.........230.........240.........250.........260.........270.........280
Sequence RQKHVMQAKLTALESQAYNLAGHSFSLTSIDDIAQVLFLELHLPQFSTTKDILEKLRPLHPLPGVILEWR
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Known secondary structure (DSSP) SS


SS
TTSSSSS






SGGGGTTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RITNALTKVVFPLQREKQYHPTLAMDRIYPIAQTHTATGRVSFTEPNIQNVPKDFEICMAFSVSMRHAFV
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Known secondary structure (DSSP) TTTTT


B



SSS


B
SS
GGG







GGGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence PFSGGMILAADYSQLELRVLAHLSKDQRLLQVLNGGADVFRCIAAEWKGVDPETVNDSLRQQAKQICYGI
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Known secondary structure (DSSP)
STTTTT
TTT


S
GGG

 .........430.........440.........450.........460.........470.........480.........490
Sequence IYGMGAKSLGEQMGVEENDAACYIESFKARYKGINAFLKETVKNCIKNGYVQTLMGRRRYLPGISNTNTH
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Known secondary structure (DSSP) TT

S

SS
TTS

GGGG
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence IKAHAERQAVNTTVQGSAADIVKLATVNIQKRLRKTYPTAPLSHQHTLRGAFFVLQLHDELIYETREEDL
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Known secondary structure (DSSP)
TTS
SSTT



S




SS

TTT
 .........570.........580.........590.........
Sequence IQVAQIVKREMESAVKLYVKLKAKVKVGPSWGNLQDLDL
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Known secondary structure (DSSP) S


SS


TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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