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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8ee6A_

Fold library idPDB HeaderMoleculeTitle
c8ee6A_4.00PDB header: transport proteinChain: A: PDB Molecule: phospholipid-transporting atpase abca7;


Added to library: Sat Dec 24 12:29:22 2022
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence FWTQLMLLLWKNFMYRRRQPVQLLVELLWPLFLFFILVAVRHSHPPLEHHECHFPNKPLPSAGTVPWLQG
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Known secondary structure (DSSP)

TTS



BB


TTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LICNVNNTCFPQLTPGEEPGRLSNFNDSLVSRLLADARTVLGGASAHRDLAQELLALRSLVELRALLQRP
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Known secondary structure (DSSP) TTS


BSS

GGGSSS


S
SS


S
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence RGTSGPLELLSEALCSPACSELIGALDSHPLSRLLWRRLKPLILGKLLFAPDTPFTRKLMAQVNRTFEEL
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Known secondary structure (DSSP)

SSS

TT
S



BS

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TLLRDVREVWEMLGPRIFTFMNYSWQDAHADVGHLVGTLGRVTECLSLDKLEAAPSEAALVSRALQLLAE
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Known secondary structure (DSSP)



S

S





SST
 .........290.........300.........310.........320.........330.........340.........350
Sequence HRFWAGVVFLGPEDSSDPTEHPTPDLGPGHVRIKIRMDIDVVTRTNKIRDRFWDPGPAADPLTDLRYVWG
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Known secondary structure (DSSP) T






TTT


TTS
S
SSSSSS

TTTS


S
SS
SS

SS



TTTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence GFVYLQDLVERAAVRVLSGANPRAGLYLQQMPYPCYVDDVFLRVLSRSLPLFLTLAWIYSVTLTVKAVVR
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Known secondary structure (DSSP)
SS





B


S
 .........430.........440.........450.........460.........470.........480.........490
Sequence EKETRLRDTMRAMGLSRAVLWLGWFLSCLGPFLLSAALLVLVLKLGDILPYSHPGVVFLFLAAFAVATVT
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Known secondary structure (DSSP) T
TT

TTSS
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence QSFLLSAFFSRANLAAACGGLAYFSLYLPYVLCVAWRDRLPAGGRVAASLLSPVAFGFGCESLALLEEQG
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Known secondary structure (DSSP) TT
S
TTTTTTS
TTSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence EGAQWHNVGTRPTADVFSLAQVSGLLLLDAALYGLATWYLEAVCPGQYGKVLVEEAPPGLSPGVSVRSLE
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Known secondary structure (DSSP)

S
GGGTT

SSTTS

TTSS
SS









SS


SBB
 .........640.........650.........660.........670.........680.........690.........700
Sequence KRFPGSPQPALRGLSLDFYQGHITAFLGHNGAGKTTTLSILSGLFPPSGGSAFILGHDVRSSMAAIRPHL
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Known secondary structure (DSSP) B

SSSSS
SB




B

TT


TTSSTTTS




BTTB
GGGTGGG
 .........710.........720.........730.........740.........750.........760.........770
Sequence GVCPQYNVLFDMLTVDEHVWFYGRLKGLSAAVVGPEQDRLLQDVGLVSKQSVQTRHLSGGMQRKLSVAIA
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Known secondary structure (DSSP)
SS



SSS
TTT

T
TT

SSSS
STT
 .........780.........790.........800.........810.........820.........830.........840
Sequence FVGGSQVVILDEPTAGVDPASRRGIWELLLKYREGRTLILSTHHLDEAELLGDRVAVVAGGRLCCCGSPL
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Known secondary structure (DSSP) TTT

SS
TTSS

TTTT
SSS

SGGGTSS
SSSSSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence FLRRHLGSGYYLTLVKAVGTPQLLALVQHWVPGARLVEELPHELVLVLPYTGAHDGSFATLFRELDTRLA
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Known secondary structure (DSSP)
SSS





S





TT
STT

T
 .........920.........930.........940.........950.........960.........970.........980
Sequence ELRLTGYGISDTSLEEIFLKVVEECAADTDWALTRQQLQALLLKRFLLARRSRRGLFAQIVLPALFVGLA
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Known secondary structure (DSSP) T








 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LVFSLIVPPFGHYPALRLSPTMYGAQVSFFSEDAPGDPGRARLLEALLQEAGLEEPPVQHSSHRFSAPEV
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Known secondary structure (DSSP) T
S


S




B


GGGT
S
S



TT

SSTT






 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence PAEVAKVLASGNWTPESPSPACQCSRPGARRLLPDCPAAAGGPPPPQAVTGSGEVVQNLTGRNLSDFLVK
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Known secondary structure (DSSP)
S


SSS

S






SSS

SS



S
SS
S


SS

TTS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence TYPRLVRQGLKTKKWVNEVRYGGFSLGGRDPGLPSGQELGRSVEELWALLSPLPGGALDRVLKNLTAWAH
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Known secondary structure (DSSP) GGGTTT
SS


SB




SS
S

SS


SS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence SLDAQDSLKIWFNNKGWHSMVAFVNRASNAILRAHLPPGPARHAHSITTLNHPLNLTKEQLSEGALMASS
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Known secondary structure (DSSP) TS



TTSTTS
SST






TTGGGT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence VDVLVSICVVFAMSFVPASFTLVLIEERVTRAKHLQLMGGLSPTLYWLGNFLWDMCNYLVPACIVVLIFL
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Known secondary structure (DSSP) TTSSTTT

 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence AFQQRAYVAPANLPALLLLLLLYGWSITPLMYPASFFFSVPSTAYVVLTCINLFIGINGSMATFVLELFS
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Known secondary structure (DSSP) TT

TTST
S
TT
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence DQKLQEVSRILKQVFLIFPHFCLGRGLIDMVRNQAMADAFERLQSPLRWEVVGKNLLAMVIQGPLFLLFT
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Known secondary structure (DSSP) TSGGGTTTTSST



TTSTTTT
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence LLLQHRSQEDVARERERVVQGATQGDVLVLRNLTKVYRGQRMPAVDRLCLGIPPGECFGLLGVNGAGKTS
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Known secondary structure (DSSP) T






TT
S

TTT
S
S

TTS

TTSS
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence TFRMVTGDTLASRGEAVLAGHSVAREPSAAHLSMGYCPQSDAIFELLTGREHLELLARLRGVPEAQVAQT
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Known secondary structure (DSSP) TSS

STTTTT
T
SS



SSSBT

GGG
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence AGSGLARLGLSWYADRPAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAVVREG
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Known secondary structure (DSSP) T

STTSSSBGGG

TT

SS

SS

T
 .........1690.........1700.........1710.........1720.........1730.........1740.........1750
Sequence RSVMLTSHSMEECEALCSRLAIMVNGRFRCLGSPQHLKGRFAAGHTLTLRVPAARSQPAAAFVAAEFPGA
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Known secondary structure (DSSP)

S

STTS

B
TS
S

SS

SS

 .........1760.........1770.........1780.........1790.........1800........
Sequence ELREAHGGRLRFQLPPGGRCALARVFGELAVHGAEHGVEDFSVSQTMLEEVFLYFSKD
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Known secondary structure (DSSP)
SS


SS
SS
TTT


S
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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