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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8ecnB_

Fold library idPDB HeaderMoleculeTitle
c8ecnB_2.70PDB header: virusChain: B: PDB Molecule: major capsid protein;


Added to library: Sat Feb 4 19:43:37 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AVLKTSSFQLPRHLVPGVWQKAQGQSVLARLSNAEPQEFGEQQYMTLTAPPRGEVVGESAEKSESTATFA
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Known secondary structure (DSSP)



GGGT






SS








SS





SS









SS







 .........80.........90.........100.........110.........120.........130.........140
Sequence PVTSLVRKVQVTQRFSQEVKWADESRQLGVLQTMADLSGVALGRALDLIGIHGINPLTGAALAGTPPKII
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Known secondary structure (DSSP)
T

TT
B
TTT

B
TT



GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence DTTNVVELTTETLGLPDQAIEAAVGLVLDDSISPNGLALDNSFAFKLATQRHPTTGQKLYPELGFGTDIS
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Known secondary structure (DSSP) G
S


TTTTT
TT




T
B
TTT

BS
GGGTTSSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence GFMSLGAAVSDTVRGGPEAVTPSTGAYRTTNPNIKAVVGDFSAFRWGVQANIPLTLIEYGDPDGSGDLQR
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Known secondary structure (DSSP) TT
GGGGTTTGGG
TTT
TTSS






GGG
SS
SSSSS
TTT
 .........290.........300........
Sequence KNELAIRAEVVYGVGILSTDAFAVVRDA
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Known secondary structure (DSSP) TTS
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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