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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8ea3O_

Fold library idPDB HeaderMoleculeTitle
c8ea3O_3.70PDB header: dna binding protein/dna/rnaChain: O: PDB Molecule: cas12k;


Added to library: Sat Dec 3 11:25:37 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQITIQARLISFESNRQQLWKLMADLNTPLINELLCQLGQHPDFEKWQQKGKLPSTVVSQLCQPLKTDPR
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Known secondary structure (DSSP)


TT
TTSS

TTGGGTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FAGQPSRLYMSAIHIVDYIYKSWLAIQKRLQQQLDGKTRWLEMLNSDAELVELSGDTLEAIRVKAAEILA
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Known secondary structure (DSSP) TTTS



TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IAMSLSKTLFDAYQETEDIKSRSAISYLLKNGCKLTDKEEDSEKFAKRRRQVEIQIQRLTEKLISRMPKG
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Known secondary structure (DSSP)

S

TTTTTTTSS






S





 .........220.........230.........240.........250.........260.........270.........280
Sequence RDLTNAKWLETLLTATTTVAEDNAQAKRWQDILLTRSSSLPFPLVFETNEDMVWSKNQKGRLCVHFNGLS
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Known secondary structure (DSSP)

TT
S

SST




S



SGGG
TTS
TT
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence DLIFEVYCGNRQLHWFQRFLEDQQTKRKSKNQHSSGLFTLRNGHLVWLEGEGKGEPWNLHHLTLYCCVDN
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Known secondary structure (DSSP) T



TTTT
S
GGG
S


SSS
SG
 .........360.........370.........380.........390.........400.........410.........420
Sequence RLWTEEGTEIVRQEKADEITKFITNMKSDTQQALIQRKQSTLTRINNSFERPSQPLYQGQSHILVGVSLG
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Known secondary structure (DSSP) GGSS

TTS














 .........430.........440.........450.........460.........470.........480.........490
Sequence LEKPATVAVVDAIANKVLAYRSIKQLLGDNYELLNRQRRQQQYLSHERHKAQKNFSPNQFGASELGQHID
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Known secondary structure (DSSP) SS
S

TTTT
SGGGTTT
S



S
 .........500.........510.........520.........530.........540.........550.........560
Sequence RLLAKAIVALARTYKAGSIVLPKLGDMREVVQSEIQAIAEQKFPGYIEGQQKYAKQYRVNVHRWSYGRLI
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Known secondary structure (DSSP) TT


STTTSSS
TTT

 .........570.........580.........590.........600.
Sequence QSIQSKAAQTGIVIEEGKQPIRGSPHDKAKELALSAYNLRL
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Known secondary structure (DSSP) T



SSS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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