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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8e9gM_

Fold library idPDB HeaderMoleculeTitle
c8e9gM_2.60PDB header: membrane proteinChain: M: PDB Molecule: nadh-quinone oxidoreductase, m subunit;


Added to library: Sat Oct 15 13:18:59 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TFPWLTVLWAVPVVGAAVVILLPAAQQVLAKWLALAVSVLTLAVTAVVAIGFDPAAAQYQFVESHRWIPS
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Known secondary structure (DSSP)


S
GGG

TTS
SSGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence FGTGYILGVDGIALALVVLTAVLVPLLIIAGWNDASRQTGLAGRSVQAYLALTLAVEGMVLMSLVALDIL
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Known secondary structure (DSSP) GT
STTTTTT


GGG
B
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence LFYVFFEAMLIPMYFLIGGFGGENRSRAAVKFLLYNLFGGLIMLAAVIGLYVVTAGSDAFAAGTFDFREI
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Known secondary structure (DSSP) TSSS
TTTSTTSSSS

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence VAAVSSGEFAVNPAIMNFLFLGFMFAFAVKAPLWPFHRWLPDAAVEATPASAVLMMAVMDKVGTFGMLRY
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Known secondary structure (DSSP) TSS


TT
TTGGGS
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence CLQLFPDASTYFRPVVITLAAIGIVYGAVLAIGQTDVMRLIAYTSISHFGFIILGIFVMTSQGQSGSTLY
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Known secondary structure (DSSP)

SBTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence MINHGISTAALFLIAGFLVSRRGSRLIDSYGGVQKVAPVLAGTFLVAGLATLSLPGLAPFISEFLVLIGT
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Known secondary structure (DSSP) SS

BGGG



TT
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FTRYPVVAVFAATALVLSAVYILWTYQRMMTGPVRDGIGDGDRPVRDLVPRELVVVAPLLALLLVLGIYP
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Known secondary structure (DSSP)
SSS

TTTSSSSS







 .........500.........510......
Sequence KPALDVINPAVEHTLTTIGQTDPEPT
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Known secondary structure (DSSP) T







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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