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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8e9gF_

Fold library idPDB HeaderMoleculeTitle
c8e9gF_2.60PDB header: membrane proteinChain: F: PDB Molecule: nadh-quinone oxidoreductase subunit f;


Added to library: Sat Oct 15 12:23:50 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TPLTPVLSRFWDEPEPWTLETYRRHDGYQGLQRALSMGPDDVIAFVKDSGLRGRGGAGFPTGTKWSFIPQ
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Known secondary structure (DSSP)




SGGGGTTSSSTTSTTTTTS
T
B
SSSS

BTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence ERGDQPAGGPAAKPHYLVINADESEPGTCKDIPLLLTTPHFLVEGAIIAAYAIRARHAFIYVRGEVLPVL
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Known secondary structure (DSSP)
SS



SSS






STT

S
TGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence RRLQAAVAEAYAAGYLGTDIMGSGFDLDLIVHAGAGAYICGEETALLDSLEGRRGQPRLRPPFPAVAGLY
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Known secondary structure (DSSP) TTSSBSSGGGSS

B
S
SGGGSTTTTTS





SSS

GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence ACPTVVNNVESIASVPPIMVNGVDWFRSMGSEKSPGFTLYSLSGHVTRPGQYEAPLGITLRELLEYAGGV
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Known secondary structure (DSSP) GS
SSTSS
SSS
SSBSS
TT
BTSB
 .........290.........300.........310.........320.........330.........340.........350
Sequence RAGHQLKFWTPGGSSTPLLTAEHLDVPLDYEGMASVGSMLGTKALQIFDETTCVVRAVRRWTQFYAHESC
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Known secondary structure (DSSP) STT

SSSTTS

GGGTTSBSST


TT


TTS


 .........360.........370.........380.........390.........400.........410.........420
Sequence GKCTPCREGTYWLAQIYARLENGAGTEADIDKLLDISDNIFGKSFCALGDGAASPIMSSIKHFRDEYVAH
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Known secondary structure (DSSP) S
STTT

TTTSSS
 .........430.....
Sequence LDGGCPFDPHASTLM
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Known secondary structure (DSSP) TTTS

S
GGGGS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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