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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8e98B_

Fold library idPDB HeaderMoleculeTitle
c8e98B_3.75PDB header: transport proteinChain: B: PDB Molecule: glutamate receptor ionotropic, nmda 2c;


Added to library: Sat Dec 10 09:36:41 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TVAVVFSSSGPPQAQFRARLTPQSFLDLPLEIQPLTVGVNTTNPSSLLTQICGLLGAAHVHGIVFEDNVD
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S
TTSSTTTTTTSSS




S



S


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITS
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SSS




SSSS



SS

TT





S

TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence LHPGHALFLEGVRAVADASHVSWRLLDVVTLELGPGGPRARTQRLLRQLDAPVFVAYCSREEAEVLFAEA
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Known secondary structure (DSSP) S
SS
SSS





SSSS
ST


S

 .........220.........230.........240.........250.........260.........270.........280
Sequence AQAGLVGPGHVWLVPNLALGSTDAPPATFPVGLISVVTESWRLSLRQKVRDGVAILALGAHSYWRQHGTL
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Known secondary structure (DSSP) TTT

STT

TTS



SS

SS

SS
S
TT

TT


 .........290.........300.........310.........320.........330.........340.........350
Sequence PAPAGDCRVHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVVIALNRHRLWEMVGRWEHGVL
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STT



S

TTTSS

BTTB


B
TTSSB





TTS

GGG

 .........360.........370.........380.........390.........400.........410.........420
Sequence YMKYPVWPRYSDSRHLTVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGF
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S
SS














TTT


SSS
S

SS







SS






 .........430.........440.........450.........460.........470.........480.........490
Sequence CIDILKKLARVVKFSYDLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFV
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Known secondary structure (DSSP) T



B



SSSS


BTTB

TTS
S
SS
B

TTTTTTS


SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ETGISVMVARSDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALT
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Known secondary structure (DSSP) S





STTS



SS



B


SSSS





SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence SLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFLGDGET
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Known secondary structure (DSSP) TS
S
SSSSS


BS
GGG

B

STT
TTTT
 .........640..
Sequence QKLETVWLSGIC
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Known secondary structure (DSSP) S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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