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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c8e1uA_

Fold library idPDB HeaderMoleculeTitle
c8e1uA_2.65PDB header: lyaseChain: A: PDB Molecule: ppi-dependent pepck;


Added to library: Sat Jun 10 08:45:59 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSVVERRQINAAINLRLSLLGLPHPDSDAILVEPLLARQRELSRRLKDRLSAPDLRIQRFLDDYLADCDE
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Known secondary structure (DSSP)

TT






TTT


TTTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence HPQLPRTTLVLDEPGLARGLSLPVDGDEFHSDIVASYRLVNGVLHNPKHDRRTTAGVFHISTGGLPIPQD
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Known secondary structure (DSSP)




SS


STTTS
SS
S
SSTTS

S


TTTSSSS


TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KVEVDKNVYARILARAFQAPDEELALPYTANLPEQAHCWASLLMRPTVLPAVPGRTTEKSYEVHFIVPGG
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Known secondary structure (DSSP) S
TS

B
GGGTTSSS

B




BTTTB

GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LMCNLDFVEGIFGNAGDPYLPENDASLDPDSWTGHTGCVILAPHLTTMTKKSLGMPHYDDATERQRRDGQ
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Known secondary structure (DSSP) G




TTSGGG
GGGSGGG
GGGGG
BTTTTT

BTTTS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence CWRHEDDLYNDGKAFKVCARDERGVIVTVIADNYFGYCKKEVKTQISYSANLLGGAEEEHSGGAEVYPAW
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Known secondary structure (DSSP) SBSSTT
BGGGGS



TTSS



S

 .........360.........370.........380.........390.........400.........410.........420
Sequence NLNQDFTDRTPDDFTLADVISTNRELLDVRPEGYAVYKPEPNIVFIPEHSHYSMRTQTISWTAHGAEQTI
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Known secondary structure (DSSP) S



TT

SGGG
TTS
TTSTT

TT
TTTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KLLAGKHYLSPDGYRIHAKHREMDATQWHLIGTSSRAVTCHKPATVSGGGKSEISKSISDAFVFGNAFSH
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Known secondary structure (DSSP)

TT

TT

TT
S


S

TTS
SGGGTS
SGGG

B
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence DIDSAMDQVQALFDTDFTNRFADASRNGTDHRPVLSIDRSLGSVIKLLTPSIQYNDEYNAFLEGIEPDVK
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Known secondary structure (DSSP)
TS

TT
BSSGGGTTS



TT
TTS
S

TTB
TS
 .........570.........580.........590.........600.........610.........620.........630
Sequence ELAFTVKRYYLPEWGEDWRSHFTVGIMNGRHGNMVRLDGKKIITNMLRVGFREDGSWRLFTLRPDYSPAV
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Known secondary structure (DSSP)

GGGTT

GGGTTTT

TTS
B
TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence KVQTEDDITASTVTPPWEDAEGLPRKYVTNCEHLLFQRPDDAIHRGYDKQAEFDLASGTDTFISNFEPLT
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Known secondary structure (DSSP) SS
S
TT
TTS

S
S

GGGGSTTT

SSSB

B
 .........710.........720.........730.........740.........750.........760.........770
Sequence HEQARDLLTDVQAYSEFTKPVRKLIERVAAMPDDQSPEFWVCSDDPRHLPDGGRSKNPRYLQVRPTDSNP
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Known secondary structure (DSSP) T
S
T

TTSS

BB

TT
B
B
TTSSB
S


S
 .........780.........790.........800.........810.........820.........830.........840
Sequence ELTTVADVAGKLARKLPLAGHAPQPIDVVAAGRRNNPPEDKVPALCAYNPLHYMELPELFMEYISSMTGK
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Known secondary structure (DSSP) TT

SSS







B


SSS

B



S

SS
 .........850.........860.........870.........880.........890.........900.........910
Sequence SPSTTGAGSEGALTKGPFNALPAVYDLNAAVLSYALTDYDGWLSSAGYIGPNARVDHDISMLIPELFSHM
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Known secondary structure (DSSP) S

SSSS

GGG
GGG
SS
TTTT

TTTTTS
 .........920.........930.........940.........950.........960.........970.........980
Sequence GPNDRNTKRLISEGYLEKMQDFDFDGHRVLASRLGYRINDRFVTHYFGRIFLHPDVVFSEEMLRPELQDE
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Known secondary structure (DSSP)
TTTT
TTS


TT
GGGG

GGGTBSSGGGTS
SGGGT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence KIFADSIDVIVKTHQRVAQMYFDDGTVSLACPPIRALLEIMAHGASAEGWTLDSPEFRKLFERESVLASD
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Known secondary structure (DSSP) SSGGGGS
SS
TTS

TT
TTST
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence WYAARLDAKQAEDVKQTEEGVERLKEYIERPDSGSVSARLHLADRLRELEAQLTYERSPEYRRSLVGTLG
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Known secondary structure (DSSP) TSGGGTTSTTTS

 ......
Sequence RQPRFV
Predicted secondary structure





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Known secondary structure (DSSP)

S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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